RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 C6orf163Q5TEZ5 329 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 SLC48A1Q6P1K1 146 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 GK5Q6ZS86 529 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 SH2D5Q6ZV89 423 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 CCDC116Q8IYX3 515 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 ZNF615Q8N8J6 731 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 FAM57AQ8TBR7 257 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 KAT2AQ92830 837 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 MARVELD3Q96A59 401 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 SDCCAG3Q96C92 435 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 L3HYPDHQ96EM0 354 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 SGCZQ96LD1 299 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 LDAHQ9H6V9 325 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 BRF2Q9HAW0 419 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 PROK2Q9HC23 129 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 PNPLA3Q9NST1 481 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMAD3-208ENST00000558827 NMRK1Q9NWW6 199 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 EHD3Q9NZN3 535 aa11.53□□□□□ -0.56
SMAD3-208ENST00000558827 MED12Q93074 2177 aa11.52□□□□□ -0.56
SMAD3-208ENST00000558827 NCOA6Q14686 2063 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-208ENST00000558827 C1orf226A1L170 272 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 C2orf72A6NCS6 295 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 COPEO14579 308 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 PLIN3O60664 434 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 GUCY1B2O75343 617 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 SPAG7O75391 227 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 CRCPO75575 148 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 GLSO94925 669 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-208ENST00000558827 FBXO45P0C2W1 286 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 CPA3P15088 417 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 PCSK2P16519 638 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 KRT4P19013 534 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 S1PR1P21453 382 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 SMSP52788 366 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 ACSM2AQ08AH3 577 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 MGAT2Q10469 447 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 FOXO1Q12778 655 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 DUSP8Q13202 625 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 PRSS53Q2L4Q9 553 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 TRMT12Q53H54 448 aaKnown RBP11.52□□□□□ -0.57
SMAD3-208ENST00000558827 EMC4Q5J8M3 183 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 CFAP157Q5JU67 520 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 ACSM2BQ68CK6 577 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 MTFR2Q6P444 385 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 SLC22A16Q86VW1 577 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 CCDC71Q8IV32 467 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-208ENST00000558827 MARVELD2Q8N4S9 558 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 GOLM1Q8NBJ4 401 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 C16orf78Q8WTQ4 265 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 DIO2Q92813 273 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 CNRIP1Q96F85 164 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-208ENST00000558827 FAIM2Q9BWQ8 316 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 NXF5Q9H1B4 397 aaKnown RBP11.52□□□□□ -0.57
SMAD3-208ENST00000558827 IL1RL2Q9HB29 575 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 MAT2BQ9NZL9 334 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 FETUBQ9UGM5 382 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 UTS2RQ9UKP6 389 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 PTGDR2Q9Y5Y4 395 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF780BQ9Y6R6 833 aa11.52□□□□□ -0.57
SMAD3-208ENST00000558827 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 CSNK2A2P19784 350 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 SOX18P35713 384 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 CCT5P48643 541 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 PKNOX1P55347 436 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 C2orf80Q0P641 193 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 PMPCAQ10713 525 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 FUT7Q11130 342 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 CSTF3Q12996 717 aaKnown RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 ART3Q13508 389 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 SLC10A1Q14973 349 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 IMPG1Q17R60 797 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 PRICKLE4Q2TBC4 344 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 GXYLT1Q4G148 440 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 C10orf62Q5T681 223 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 CLEC6AQ6EIG7 209 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 ARHGAP11AQ6P4F7 1023 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 RPTNQ6XPR3 784 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 TRILQ7L0X0 811 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 LCA5Q86VQ0 697 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 C10orf107Q8IVU9 208 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 TAGAPQ8N103 731 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 VWA5B2Q8N398 1253 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 FAM109AQ8N4B1 249 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 C7orf57Q8NEG2 295 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 OR52R1Q8NGF1 315 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 ADIPOR1Q96A54 375 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 SMC6Q96SB8 1091 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 DMRTA2Q96SC8 542 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 DOHHQ9BU89 302 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 ITPAQ9BY32 194 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 UCK2Q9BZX2 261 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 SLC6A15Q9H2J7 730 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 SH2D2AQ9NP31 389 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 MCM8Q9UJA3 840 aa11.51□□□□□ -0.57
SMAD3-208ENST00000558827 CNOT11Q9UKZ1 510 aaKnown RBP11.51□□□□□ -0.57
SMAD3-208ENST00000558827 PSME2Q9UL46 239 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms