RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 RABL3Q5HYI8 236 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 FHL5Q5TD97 284 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 LCN10Q6JVE6 187 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 ERICH5Q6P6B1 374 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 TMEM205Q6UW68 189 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 TMEM107Q6UX40 140 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 NET1Q7Z628 596 aaPredicted RBP13.91□□□□□ -0.18
VPS18-202ENST00000558474 CALHM3Q86XJ0 350 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 ULK2Q8IYT8 1036 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 VWA5B2Q8N398 1253 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 KIF2BQ8N4N8 673 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 NUP43Q8NFH3 380 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 OR2Y1Q8NGV0 311 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 DAZLQ92904 295 aaKnown RBP13.91□□□□□ -0.18
VPS18-202ENST00000558474 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 ALG2Q9H553 416 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 DDX18Q9NVP1 670 aaKnown RBP13.91□□□□□ -0.18
VPS18-202ENST00000558474 GIN1Q9NXP7 522 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 FOXJ2Q9P0K8 574 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 SUCOQ9UBS9 1254 aaKnown RBP13.91□□□□□ -0.18
VPS18-202ENST00000558474 C3orf18Q9UK00 162 aa13.91□□□□□ -0.18
VPS18-202ENST00000558474 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.91□□□□□ -0.18
VPS18-202ENST00000558474 SEC16AO15027 2179 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 FAM149AA5PLN7 773 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 FAM220BPB1ANY3 271 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 UPK1AO00322 258 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 ASNA1O43681 348 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 CNOT3O75175 753 aaKnown RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 KLF7O75840 302 aaPredicted RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 PSMG1O95456 288 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 AGR2O95994 175 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 IFNA16P05015 189 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 MC3RP41968 323 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 PRIM2P49643 509 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 MVDP53602 400 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 RPS15P62841 145 aaKnown RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 LIPEQ05469 1076 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 RBBP4Q09028 425 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 FUT7Q11130 342 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 TRAP1Q12931 704 aaKnown RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 CEACAM7Q14002 265 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 FXNQ16595 210 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 TIPARPQ7Z3E1 657 aaKnown RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 LAPTM4BQ86VI4 370 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 TMEM151BQ8IW70 566 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 MORN4Q8NDC4 146 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 OR7G2Q8NG99 324 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 REXO5Q96IC2 774 aaKnown RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 FBXL20Q96IG2 436 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 SLC35G5Q96KT7 338 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 ZNF583Q96ND8 569 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 CRB3Q9BUF7 120 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 TMEM38AQ9H6F2 299 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 AKIRIN1Q9H9L7 192 aaPredicted RBP13.9□□□□□ -0.18
VPS18-202ENST00000558474 BCAP29Q9UHQ4 241 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 CFL2Q9Y281 166 aa13.9□□□□□ -0.18
VPS18-202ENST00000558474 NUP214P35658 2090 aaPredicted RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 LOC102723996A0A087X1L8 192 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 A0A1W2PQ72 361 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 PRORSD1PA6NEY8 169 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 DUXAA6NLW8 204 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 C17orf105B2RV13 164 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 RAD1O60671 282 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 PRAMEF2O60811 474 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 TNNI3P19429 210 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 TCN2P20062 427 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 S1PR1P21453 382 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 SOX18P35713 384 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 FOLR3P41439 243 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 STAT5AP42229 794 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 GSK3BP49841 420 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 GZMMP51124 257 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 KCNJ2P63252 427 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 CAMK2BQ13554 666 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 TP53BP2Q13625 1128 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 COL9A2Q14055 689 aaPredicted RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 SELPLGQ14242 412 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 TRIM25Q14258 630 aaKnown RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 PUM1Q14671 1186 aaKnown RBP eCLIP13.89□□□□□ -0.19
VPS18-202ENST00000558474 LTB4RQ15722 352 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 FAM199XQ6PEV8 388 aaPredicted RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 ANGPTL8Q6UXH0 198 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 ANKRD37Q7Z713 158 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 PTRH1Q86Y79 214 aaKnown RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 SLC30A8Q8IWU4 369 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 METTL25Q8N6Q8 603 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 ADCY4Q8NFM4 1077 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 OR2T12Q8NG77 320 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 OR10A6Q8NH74 314 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 OR5AK3PQ8NH89 298 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 PTPMT1Q8WUK0 201 aaPredicted RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 HOXB13Q92826 284 aaPredicted RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 KAT2AQ92830 837 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 TSLPQ969D9 159 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 POP5Q969H6 163 aaKnown RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 PPWD1Q96BP3 646 aaKnown RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 ASB9Q96DX5 294 aa13.89□□□□□ -0.19
VPS18-202ENST00000558474 AURKBQ96GD4 344 aaPredicted RBP13.89□□□□□ -0.19
VPS18-202ENST00000558474 VPS50Q96JG6 964 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms