RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PCBP3P57721 371 aaKnown RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 SIM1P81133 766 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 CDK6Q00534 326 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 TNFRSF17Q02223 184 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 RBBP4Q09028 425 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 FADDQ13158 208 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 SCARB2Q14108 478 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 NRF1Q16656 503 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 LRRC23Q53EV4 343 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 C6orf52Q5T4I8 152 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 INTS11Q5TA45 600 aaKnown RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 TNFAIP8L2Q6P589 184 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 KLHL35Q6PF15 583 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 ANGPTL8Q6UXH0 198 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 ZBTB49Q6ZSB9 765 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 CCDC80Q76M96 950 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 ABHD13Q7L211 337 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 TSEN54Q7Z6J9 526 aaKnown RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 TMEM179BQ7Z7N9 219 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 C1orf210Q8IVY1 113 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 CA13Q8N1Q1 262 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 CBR4Q8N4T8 237 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 ARL10Q8N8L6 244 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 TMEM105Q8N8V8 129 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 TMEM52Q8NDY8 209 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 OR5T3Q8NGG3 340 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 OR9A2Q8NGT5 310 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 NCSTNQ92542 709 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 EME1Q96AY2 570 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 TAMM41Q96BW9 452 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 TGM7Q96PF1 710 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 BTBD9Q96Q07 612 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 ELF4Q99607 663 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 ROGDIQ9GZN7 287 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 RAB33BQ9H082 229 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 LYRM4Q9HD34 91 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 VNN3Q9NY84 501 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 LRIT1Q9P2V4 623 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 PHF11Q9UIL8 331 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 DAPP1Q9UN19 280 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 PCDHGB5Q9Y5G0 923 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 MAGED1Q9Y5V3 778 aaPredicted RBP6.93□□□□□ -1.3
SPG11-204ENST00000557866 SLC22A7Q9Y694 548 aa6.93□□□□□ -1.3
SPG11-204ENST00000557866 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 IGHV1OR21-1A0A087WYE8 117 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 LY6G6EA0A0G2JKS1 128 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 A0A1B0GTQ1 180 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TMEM221A6NGB7 291 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TLCD2A6NGC4 264 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 URADA6NGE7 173 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 PRAMEF25A6NGN4 478 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 EIF4E1BA6NMX2 242 aaKnown RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 H0YJX3 145 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 M0R296 226 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 PLOD2O00469 737 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 HMGN4O00479 90 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 DENRO43583 198 aaKnown RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 FOXS1O43638 330 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 NUDT21O43809 227 aaKnown RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 NME6O75414 186 aaPredicted RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 ZNF682O95780 498 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 RECKO95980 971 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 CSNK2A2P19784 350 aaPredicted RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 EPHA8P29322 1005 aaPredicted RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 ALDH4A1P30038 563 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 CSF2RBP32927 897 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 DSTNP60981 165 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 KCNJ10P78508 379 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 ID2Q02363 134 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 BIRC2Q13490 618 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SPIDRQ14159 915 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 GK3PQ14409 553 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 MYBPC3Q14896 1274 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 NR1D2Q14995 579 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 LTB4RQ15722 352 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 GPR19Q15760 415 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SPDYE7PQ495Y7 208 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 CYBRD1Q53TN4 286 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 NHSL2Q5HYW2 709 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TMTC4Q5T4D3 741 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TMEM107Q6UX40 140 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 CEACAM20Q6UY09 585 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TMEM64Q6YI46 380 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 ZAR1Q86SH2 424 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 ZC3H7AQ8IWR0 971 aaKnown RBP6.92□□□□□ -1.3
SPG11-204ENST00000557866 OR4N5Q8IXE1 308 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 HS3ST5Q8IZT8 346 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 DTWD2Q8NBA8 298 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SFXN5Q8TD22 340 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 SLC38A5Q8WUX1 472 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 PIGKQ92643 395 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 GATA6Q92908 595 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 RAB8BQ92930 207 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TMBIM1Q969X1 311 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 ELP4Q96EB1 424 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 GIMAP5Q96F15 307 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 C16orf58Q96GQ5 468 aa6.92□□□□□ -1.3
SPG11-204ENST00000557866 TCTN2Q96GX1 697 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms