RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 OR8J2Q8NGG1 315 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 OR5P2Q8WZ92 322 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 CTHRC1Q96CG8 243 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 SMAD5Q99717 465 aaKnown RBP16.29■□□□□ 0.2
PSEN1-218ENST00000556864 SLAMF7Q9NQ25 335 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 RYDENQ9NUL5 291 aaKnown RBP16.29■□□□□ 0.2
PSEN1-218ENST00000556864 DDX18Q9NVP1 670 aaKnown RBP16.29■□□□□ 0.2
PSEN1-218ENST00000556864 TMEM45AQ9NWC5 275 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 FAM120CQ9NX05 1096 aaKnown RBP16.29■□□□□ 0.2
PSEN1-218ENST00000556864 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 CCDC88CQ9P219 2028 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 ZZEF1O43149 2961 aa16.29■□□□□ 0.2
PSEN1-218ENST00000556864 CFAP47Q6ZTR5 3102 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 TPRP12270 2363 aaKnown RBP16.28■□□□□ 0.2
PSEN1-218ENST00000556864 A0A087WV62 115 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 GMNCA6NCL1 334 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 RNASET2O00584 256 aaKnown RBP16.28■□□□□ 0.2
PSEN1-218ENST00000556864 PLOD3O60568 738 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 CT62P0C5K7 136 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 SSTR4P31391 388 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 CASRP41180 1078 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 MC3RP41968 323 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 SLC37A1P57057 533 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 UFM1P61960 85 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 MRPS35P82673 323 aaKnown RBP16.28■□□□□ 0.2
PSEN1-218ENST00000556864 MPEG1Q2M385 716 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 FAM174BQ3ZCQ3 159 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 HLA-DQA1Q5Y7H0 255 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 TCTN3Q6NUS6 607 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 H3F3CQ6NXT2 135 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 FAM111BQ6SJ93 734 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 TMEM107Q6UX40 140 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 SPATA21Q7Z572 469 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF321PQ8N8H1 164 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 NUBPLQ8TB37 319 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 PSMF1Q92530 271 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 ABHD17AQ96GS6 310 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 GAL3ST4Q96RP7 486 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 OR10A5Q9H207 317 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF552Q9H707 407 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF639Q9UID6 485 aa16.28■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF223Q9UK11 482 aaPredicted RBP16.28■□□□□ 0.2
PSEN1-218ENST00000556864 COPG1Q9Y678 874 aaKnown RBP16.28■□□□□ 0.2
PSEN1-218ENST00000556864 ITPR1Q14643 2758 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 FAM234BA2RU67 622 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 HRKO00198 91 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 PLOD2O00469 737 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 CDK2AP1O14519 115 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 IL6P05231 212 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 NCF2P19878 526 aaPredicted RBP16.27■□□□□ 0.2
PSEN1-218ENST00000556864 PTGER1P34995 402 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 RNF4P78317 190 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 MGAT2Q10469 447 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 EBPQ15125 230 aaKnown RBP16.27■□□□□ 0.2
PSEN1-218ENST00000556864 SPANXN4Q5MJ08 99 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 ACER2Q5QJU3 275 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 OR4F3Q6IEY1 312 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 MSANTD1Q6ZTZ1 278 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 ZNF551Q7Z340 670 aaPredicted RBP16.27■□□□□ 0.2
PSEN1-218ENST00000556864 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 RPS19BP1Q86WX3 136 aaKnown RBP16.27■□□□□ 0.2
PSEN1-218ENST00000556864 C9orf40Q8IXQ3 194 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 ARMC10Q8N2F6 343 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 OR52R1Q8NGF1 315 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 DOK4Q8TEW6 326 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 KAT2AQ92830 837 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 LMF1Q96S06 567 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 WWTR1Q9GZV5 400 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 FAM107BQ9H098 131 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 RNF32Q9H0A6 362 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 C3orf14Q9HBI5 128 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 TAS2R9Q9NYW1 312 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 PCDHGB4Q9UN71 923 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 TP53TG5Q9Y2B4 290 aa16.27■□□□□ 0.2
PSEN1-218ENST00000556864 DYTNA2CJ06 578 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 CFLARO15519 480 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 DPM1O60762 260 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 CBX7O95931 251 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 CLPSP04118 112 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 CDK9P50750 372 aaKnown RBP16.26■□□□□ 0.19
PSEN1-218ENST00000556864 POLR2JP52435 117 aaKnown RBP16.26■□□□□ 0.19
PSEN1-218ENST00000556864 SEC24CP53992 1094 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 KCNK10P57789 538 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 PSPHP78330 225 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 PRR5P85299 388 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 ZNF155Q12901 538 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-218ENST00000556864 EXOSC7Q15024 291 aaKnown RBP16.26■□□□□ 0.19
PSEN1-218ENST00000556864 SPDYE7PQ495Y7 208 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 B3GNTL1Q67FW5 361 aaPredicted RBP16.26■□□□□ 0.19
PSEN1-218ENST00000556864 FCRLBQ6BAA4 426 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 TMEM64Q6YI46 380 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 LINC00696Q6ZRV3 163 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 SZRD1Q7Z422 152 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 OR2L13Q8N349 312 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 ZNF615Q8N8J6 731 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 LSM14AQ8ND56 463 aaKnown RBP16.26■□□□□ 0.19
PSEN1-218ENST00000556864 OR7G2Q8NG99 324 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 SLC22A8Q8TCC7 542 aa16.26■□□□□ 0.19
PSEN1-218ENST00000556864 C10orf82Q8WW14 230 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms