RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 ID1P41134 155 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 TNFRSF4P43489 277 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 NLRP11P59045 1033 aaKnown RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 GMFBP60983 142 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 CCZ1BP86790 482 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 CCZ1P86791 482 aaPredicted RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 KARSQ15046 597 aaKnown RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 P2RY14Q15391 338 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 CARTPTQ16568 116 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 ZNF239Q16600 458 aaKnown RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 TMEM44Q2T9K0 475 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 SLC25A30Q5SVS4 291 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 ARMCX5Q6P1M9 558 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 BNIPLQ7Z465 357 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 CNNM3Q8NE01 707 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 ANKRD20A12PQ8NF67 263 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 OR4Q3Q8NH05 313 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 RSPH1Q8WYR4 309 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 RAB39BQ96DA2 213 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 RBM18Q96H35 190 aaKnown RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 RPGRIP1Q96KN7 1286 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 GPR137Q96N19 417 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 JPH2Q9BR39 696 aaPredicted RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 SLC26A1Q9H2B4 701 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 LIME1Q9H400 295 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 ELL3Q9HB65 397 aaPredicted RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 ZNF581Q9P0T4 197 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 DIMT1Q9UNQ2 313 aaKnown RBP3.28□□□□□ -1.88
FCF1-208ENST00000556814 FBXO7Q9Y3I1 522 aa3.28□□□□□ -1.88
FCF1-208ENST00000556814 TEX48A0A1B0GUV7 120 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 TMEM89A2RUT3 159 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 YJEFN3A6XGL0 299 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 CHEK1O14757 476 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 DUSP11O75319 330 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 SYNGR4O95473 234 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 PTBP3O95758 552 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 RENP00797 406 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 GHRP10912 638 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 PRDX6P30041 224 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 PPP2R1BP30154 601 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 CHRNA3P32297 505 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 ELK3P41970 407 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 CCL11P51671 97 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 LIMK2P53671 638 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 POLR2FP61218 127 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 EMC2Q15006 297 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 EXOSC7Q15024 291 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 GPAT3Q53EU6 434 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 CMPK2Q5EBM0 449 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 DCAF12Q5T6F0 453 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 RTL6Q6ICC9 239 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 RBM43Q6ZSC3 357 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 CEACAM19Q7Z692 300 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 ADGRD2Q7Z7M1 963 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 PARP8Q8N3A8 854 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 OR1K1Q8NGR3 316 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 FBXO25Q8TCJ0 367 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 KCNK16Q96T55 309 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 CXXC4Q9H2H0 198 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 NGBQ9NPG2 151 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 SOHLH2Q9NX45 425 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 VPS54Q9P1Q0 977 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 EIF3KQ9UBQ5 218 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 CIDEBQ9UHD4 219 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 MRPS2Q9Y399 296 aaKnown RBP3.27□□□□□ -1.89
FCF1-208ENST00000556814 CLCA3PQ9Y6N3 262 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 FER1L5A0AVI2 2057 aa3.27□□□□□ -1.89
FCF1-208ENST00000556814 RGSL1A5PLK6 1076 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 FOXI3A8MTJ6 420 aaPredicted RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 MEI4A8MW99 385 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 SRRM5B3KS81 715 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 E9PAM4 449 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 RASGRF2O14827 1237 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 TSPAN2O60636 221 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 SRSF10O75494 262 aaKnown RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 SEMA4FO95754 770 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 TXNDC12O95881 172 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 PROS1P07225 676 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 HCKP08631 526 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 ZCCHC18P0CG32 403 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 GP9P14770 177 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 FOSL2P15408 326 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 BRCC3P46736 316 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 TRA2BP62995 288 aaKnown RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 TTC31Q49AM3 519 aaPredicted RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 EIPR1Q53HC9 387 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 HERC4Q5GLZ8 1057 aaPredicted RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 LDLRAP1Q5SW96 308 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 LEMD1Q68G75 181 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 CDC42EP5Q6NZY7 148 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 REG3GQ6UW15 175 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 ITIH5Q86UX2 942 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 CCDC71Q8IV32 467 aaPredicted RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 SUMF1Q8NBK3 374 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 ZNRF1Q8ND25 227 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 TAF4BQ92750 862 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 MRPL38Q96DV4 380 aaKnown RBP3.26□□□□□ -1.89
FCF1-208ENST00000556814 COQ7Q99807 217 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 CLIP2Q9UDT6 1046 aa3.26□□□□□ -1.89
FCF1-208ENST00000556814 ZNF346Q9UL40 294 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms