RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 ENO1P06733 434 aaKnown RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 VIMP08670 466 aaKnown RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 CPMP14384 443 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 CPA3P15088 417 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 S1PR1P21453 382 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 KRT6CP48668 564 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 SLC18A1P54219 525 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 PKNOX1P55347 436 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 MGAT2Q10469 447 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 FUT7Q11130 342 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 FOXO1Q12778 655 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF267Q14586 743 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 OPN5Q6U736 354 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 RNF111Q6ZNA4 994 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 NCCRP1Q6ZVX7 275 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 SPPL2CQ8IUH8 684 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 TRIM42Q8IWZ5 723 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 GALNT12Q8IXK2 581 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 ZNF615Q8N8J6 731 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 OR4K14Q8NGD5 310 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 OR52N2Q8NGI0 321 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 CHTF18Q8WVB6 975 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 RIT1Q92963 219 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 SPACA9Q96E40 222 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 GAL3ST4Q96RP7 486 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 MECRQ9BV79 373 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 TTTY12Q9BZ98 90 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 FAM107BQ9H098 131 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 ZDHHC11Q9H8X9 412 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.53□□□□□ -0.886e-6■■□□□ 12.1
SHMT2-224ENST00000556737 AHSPQ9NZD4 102 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 HEY2Q9UBP5 337 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 VPS29Q9UBQ0 182 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 MCM8Q9UJA3 840 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 LIPGQ9Y5X9 500 aa9.53□□□□□ -0.88
SHMT2-224ENST00000556737 CHCHD2Q9Y6H1 151 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-224ENST00000556737 CSMD1Q96PZ7 3565 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 A0A1B0GTH9 108 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 C1orf226A1L170 272 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SERTM1A2A2V5 107 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 FAM166BA8MTA8 275 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PCDH7O60245 1069 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 ATP1B1P05026 303 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 BPGMP07738 259 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 FBXO45P0C2W1 286 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 BGNP21810 368 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PIK3R1P27986 724 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 HMOX2P30519 316 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 DNASE1L1P49184 302 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 XKP51811 444 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 DNAJB13P59910 316 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 TRA2BP62995 288 aaKnown RBP9.52□□□□□ -0.89
SHMT2-224ENST00000556737 HMGCS1Q01581 520 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PCLAFQ15004 111 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 LTB4RQ15722 352 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 CHI3L2Q15782 390 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 HYAL4Q2M3T9 481 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PRICKLE4Q2TBC4 344 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 RPTNQ6XPR3 784 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SLC29A4Q7RTT9 530 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 DOLPP1Q86YN1 238 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 FBXW8Q8N3Y1 598 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SLC15A4Q8N697 577 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 GBP7Q8N8V2 638 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SIMC1Q8NDZ2 872 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 OR10G3Q8NGC4 313 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 RDH11Q8TC12 318 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 METTL6Q8TCB7 284 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SLC22A8Q8TCC7 542 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PAQR8Q8TEZ7 354 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 ADIPOR1Q96A54 375 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 CCDC126Q96EE4 140 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 CNRIP1Q96F85 164 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-224ENST00000556737 APIPQ96GX9 242 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SGCZQ96LD1 299 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 MAGEB18Q96M61 343 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF681Q96N22 645 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 DMRTA2Q96SC8 542 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 FAM173AQ9BQD7 235 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 PROK2Q9HC23 129 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SACM1LQ9NTJ5 587 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 TUBA8Q9NY65 449 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-224ENST00000556737 MAT2BQ9NZL9 334 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 SUCOQ9UBS9 1254 aaKnown RBP9.52□□□□□ -0.89
SHMT2-224ENST00000556737 ZNF639Q9UID6 485 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 CNOT11Q9UKZ1 510 aaKnown RBP9.52□□□□□ -0.89
SHMT2-224ENST00000556737 DTX4Q9Y2E6 619 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 MEMO1Q9Y316 297 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 TIMM22Q9Y584 194 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 CENPEQ02224 2701 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 TEX15Q9BXT5 2789 aa9.52□□□□□ -0.89
SHMT2-224ENST00000556737 LRRC3CA6NJW4 275 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ULK1O75385 1050 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CBX7O95931 251 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 IL3P08700 152 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 CELA3AP09093 270 aa9.51□□□□□ -0.89
SHMT2-224ENST00000556737 PORP16435 677 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-224ENST00000556737 ABOP16442 354 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms