RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 MIPOL1Q8TD10 442 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 SNRNP27Q8WVK2 155 aaKnown RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 CCNL2Q96S94 520 aaPredicted RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 PAIP1Q9H074 479 aaKnown RBP10.51□□□□□ -0.73
FOXN3-212ENST00000556541 EFCAB1Q9HAE3 211 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 C3orf14Q9HBI5 128 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 GID8Q9NWU2 228 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 NDE1Q9NXR1 346 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 IL17BQ9UHF5 180 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 VPS4AQ9UN37 437 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 CORO2BQ9UQ03 480 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 AP3M1Q9Y2T2 418 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 CLCA3PQ9Y6N3 262 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 APC2O95996 2303 aa10.51□□□□□ -0.73
FOXN3-212ENST00000556541 WDFY3Q8IZQ1 3526 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 A0A1W2PS29 197 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 C17orf105B2RV13 164 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 RRP8O43159 456 aaKnown RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 PRAMEF2O60811 474 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ATP5HO75947 161 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 C6orf47O95873 294 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 IFNA16P05015 189 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ABCB1P08183 1280 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 KRT16P08779 473 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 NT5EP21589 574 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 SLC26A5P58743 744 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ID2Q02363 134 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 IL10RAQ13651 578 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 TGIF1Q15583 401 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 SPATS1Q496A3 300 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 PAGE3Q5JUK9 113 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 AP1ARQ63HQ0 302 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 SAXO2Q658L1 398 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 REP15Q6BDI9 236 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 JMJD6Q6NYC1 403 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 C8orf82Q6P1X6 216 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 DLEU7Q6UYE1 221 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 LANCL3Q6ZV70 420 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ZNF551Q7Z340 670 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 GPR155Q7Z3F1 870 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 RETREG3Q86VR2 466 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 PRSS58Q8IYP2 241 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 CLECL1Q8IZS7 167 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 LGI4Q8N135 537 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ZNF615Q8N8J6 731 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 TMEM102Q8N9M5 508 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 OR9A2Q8NGT5 310 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 SLC2A12Q8TD20 617 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ELP5Q8TE02 316 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ZNF721Q8TF20 911 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 VPS33AQ96AX1 596 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 NEURL3Q96EH8 262 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 VMP1Q96GC9 406 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 SENP5Q96HI0 755 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 NSL1Q96IY1 281 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 FER1L6-AS2Q96M78 137 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 PANX1Q96RD7 426 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 HOPXQ9BPY8 73 aaPredicted RBP10.5□□□□□ -0.73
FOXN3-212ENST00000556541 C1orf21Q9H246 121 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 RAD21L1Q9H4I0 556 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 EPS8L2Q9H6S3 715 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 MMP25Q9NPA2 562 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 P4HTMQ9NXG6 502 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 MAP10Q9P2G4 905 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 COPS7AQ9UBW8 275 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 PRODH2Q9UF12 536 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 ERVK-11Q9UQG0 969 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 AKAP13Q12802 2813 aa10.5□□□□□ -0.73
FOXN3-212ENST00000556541 PCSK5Q92824 1860 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 CEP295Q9C0D2 2601 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 A0A087WV48 116 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 OR2W5A6NFC9 320 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 C9JVG2 144 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 FXYD1O00168 92 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 UPK1AO00322 258 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 PEX12O00623 359 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 MRASO14807 208 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 ASNA1O43681 348 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 KRT75O95678 551 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 CBX7O95931 251 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 CLPSP04118 112 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 GUSBP08236 651 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 BMP2P12643 396 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 GPC1P35052 558 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 MAP3K8P41279 467 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 CCT3P49368 545 aaKnown RBP10.49□□□□□ -0.73
FOXN3-212ENST00000556541 CDK9P50750 372 aaKnown RBP10.49□□□□□ -0.73
FOXN3-212ENST00000556541 ANXA11P50995 505 aaKnown RBP10.49□□□□□ -0.73
FOXN3-212ENST00000556541 RRADP55042 308 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 SLC37A1P57057 533 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 DCAF7P61962 342 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 RPS18P62269 152 aaKnown RBP10.49□□□□□ -0.73
FOXN3-212ENST00000556541 BNIP1Q12981 228 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 HSPB3Q12988 150 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 CHAF1BQ13112 559 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 FADDQ13158 208 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 ZNF750Q32MQ0 723 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 MMEL1Q495T6 779 aa10.49□□□□□ -0.73
FOXN3-212ENST00000556541 UNQ6494/PRO21346Q6UXR6 183 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms