RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ARG2P78540 354 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 OCRLQ01968 901 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 C2orf80Q0P641 193 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 POU4F2Q12837 409 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 DUSP8Q13202 625 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ZNF267Q14586 743 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 ZNF169Q14929 603 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 PRICKLE4Q2TBC4 344 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 C6orf136Q5SQH8 315 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 RPUSD3Q6P087 351 aaKnown RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 FAM180BQ6P0A1 224 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 IKBIPQ70UQ0 350 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ZNF605Q86T29 641 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 C9orf40Q8IXQ3 194 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 MDS2Q8NDY4 140 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 SUN3Q8TAQ9 357 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 NUBPLQ8TB37 319 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 THAP3Q8WTV1 239 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 ZNF75CPQ92670 426 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 KLHL29Q96CT2 875 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 C19orf60Q96EN9 201 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ZNF764Q96H86 408 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 PPP3R2Q96LZ3 170 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 SIGLEC12Q96PQ1 595 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 GRIP2Q9C0E4 1043 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 MANSC1Q9H8J5 431 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 LIN28AQ9H9Z2 209 aaKnown RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 THAP1Q9NVV9 213 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 LUZP4Q9P127 313 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 MYOTQ9UBF9 498 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 BAIAP2L1Q9UHR4 511 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 UTS2RQ9UKP6 389 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 ERVK-19Q9WJR5 959 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 HEMK1Q9Y5R4 338 aaPredicted RBP8.95□□□□□ -0.98
SRP54-210ENST00000556380 RELNP78509 3460 aa8.95□□□□□ -0.98
SRP54-210ENST00000556380 CPAMD8Q8IZJ3 1885 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 BAHCC1Q9P281 2608 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 TRAV17A0A0B4J275 112 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 DYRK3O43781 588 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 SLC28A2O43868 658 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 PRAMEF2O60811 474 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 PEX11AO75192 247 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 SKAP2O75563 359 aaPredicted RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 ERAL1O75616 437 aaKnown RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 NADKO95544 446 aaPredicted RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 SSTR4P31391 388 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 PTGER1P34995 402 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 ALDH9A1P49189 494 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 HLCSP50747 726 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 RPL38P63173 70 aaKnown RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 TLE1Q04724 770 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 PDE7AQ13946 482 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 MPEG1Q2M385 716 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 SMU1Q2TAY7 513 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 GALNTL6Q49A17 601 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 PRR30Q53SZ7 412 aaPredicted RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 ZNF628Q5EBL2 1059 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 PIGGQ5H8A4 983 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 SPINK14Q6IE38 97 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 FAM111BQ6SJ93 734 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 TICAM1Q8IUC6 712 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 TRIM42Q8IWZ5 723 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 GALNT12Q8IXK2 581 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 KIRREL3Q8IZU9 778 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 ZNF441Q8N8Z8 693 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 SIMC1Q8NDZ2 872 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 OR5L2Q8NGL0 311 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 ZNF675Q8TD23 568 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 EXOSC8Q96B26 276 aaKnown RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 SNRNP40Q96DI7 357 aaKnown RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 ZNF837Q96EG3 531 aaPredicted RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 SCMH1Q96GD3 660 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 ART5Q96L15 291 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 UTP23Q9BRU9 249 aaKnown RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 AKTIPQ9H8T0 292 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 MAT2BQ9NZL9 334 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 COPS7AQ9UBW8 275 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 NTNG1Q9Y2I2 539 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 YARS2Q9Y2Z4 477 aaKnown RBP8.94□□□□□ -0.98
SRP54-210ENST00000556380 PCDHGB6Q9Y5F9 930 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 ZNF780BQ9Y6R6 833 aa8.94□□□□□ -0.98
SRP54-210ENST00000556380 SHANK1Q9Y566 2161 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 OR6C76A6NM76 312 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 WWP2O00308 870 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ZNF195O14628 629 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ITGA10O75578 1167 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 OR2J2O76002 312 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 CBX7O95931 251 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 NT5EP21589 574 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 EMX2Q04743 252 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 SRSF11Q05519 484 aaKnown RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 EBPQ15125 230 aaKnown RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 OR1C1Q15619 314 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 LTB4RQ15722 352 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 INPP5JQ15735 1006 aaPredicted RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 PDCD2Q16342 344 aaPredicted RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 ATP6AP1LQ52LC2 224 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 TRMT12Q53H54 448 aaKnown RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 ZNF385BQ569K4 471 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 FHL5Q5TD97 284 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms