RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 C16orf78Q8WTQ4 265 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CNRIP1Q96F85 164 aaPredicted RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SGCZQ96LD1 299 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 ZIM3Q96PE6 472 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 GAL3ST4Q96RP7 486 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 EHD3Q9NZN3 535 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 HEY2Q9UBP5 337 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SEC14L3Q9UDX4 400 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 UTS2RQ9UKP6 389 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 CCL27Q9Y4X3 112 aa10.67□□□□□ -0.7
SLIRP-205ENST00000556310 DIDO1Q9BTC0 2240 aaKnown RBP10.67□□□□□ -0.7
SLIRP-205ENST00000556310 SLC28A1O00337 649 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 CTIFO43310 598 aaKnown RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF354AO60765 605 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ERLIN1O75477 346 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 UNC5CO95185 931 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 NADKO95544 446 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 BPGMP07738 259 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 FEN1P39748 380 aaKnown RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 MEOX1P50221 254 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 KCNK10P57789 538 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 SRSF11Q05519 484 aaKnown RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 PRICKLE4Q2TBC4 344 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 OXLD1Q5BKU9 147 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 TNFAIP8L3Q5GJ75 292 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ARL13AQ5H913 290 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 LRIG3Q6UXM1 1119 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ZCCHC23Q6ZST2 131 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 SIAH3Q8IW03 269 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 SULF2Q8IWU5 870 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 DND1Q8IYX4 353 aaKnown RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF615Q8N8J6 731 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF441Q8N8Z8 693 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 OR7G1Q8NGA0 311 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 SSC4DQ8WTU2 575 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 SPACA9Q96E40 222 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 PGM2Q96G03 612 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 GPR137Q96N19 417 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF681Q96N22 645 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 OR10A5Q9H207 317 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 EML4Q9HC35 981 aaKnown RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 MYNNQ9NPC7 610 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 GIMAP4Q9NUV9 329 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 MAT2BQ9NZL9 334 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ERRFI1Q9UJM3 462 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ENTPD4Q9Y227 616 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 OSGIN2Q9Y236 505 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 SLC5A6Q9Y289 635 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 WBP11Q9Y2W2 641 aaKnown RBP10.66□□□□□ -0.7
SLIRP-205ENST00000556310 FIS1Q9Y3D6 152 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 PTGDR2Q9Y5Y4 395 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ACTL7BQ9Y614 415 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF780BQ9Y6R6 833 aa10.66□□□□□ -0.7
SLIRP-205ENST00000556310 ICE1Q9Y2F5 2266 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 C2orf92A0A1B0GVN3 265 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 J3QL48 77 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 TM9SF1O15321 606 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 RGS14O43566 566 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PEX1O43933 1283 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 FGF4P08620 206 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 STSP08842 583 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 MYZAPP0CAP1 466 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 DDCP20711 480 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 S1PR1P21453 382 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 SERPINB4P48594 390 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 GPR85P60893 370 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PRR20EP86478 221 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PRR20CP86479 221 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PRR20DP86480 221 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PRR20BP86481 221 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PRR20AP86496 221 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 DUSP2Q05923 314 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 RBPJQ06330 500 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 MGAT2Q10469 447 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 MAP4K2Q12851 820 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CEBPEQ15744 281 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.65□□□□□ -0.75e-7■■■■□ 21.9
SLIRP-205ENST00000556310 ZNF791Q3KP31 576 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-205ENST00000556310 C4orf17Q53FE4 359 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 KRTCAP3Q53RY4 240 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 NOXRED1Q6NXP6 359 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 IKBIPQ70UQ0 350 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 EXOC3L1Q86VI1 746 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CCDC116Q8IYX3 515 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CLYBLQ8N0X4 340 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 TAGAPQ8N103 731 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 ZFP62Q8NB50 900 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-205ENST00000556310 C17orf47Q8NEP4 570 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 OR6Y1Q8NGX8 325 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CDC26Q8NHZ8 85 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.65□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF675Q8TD23 568 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 TWIST2Q8WVJ9 160 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 TP53INP1Q96A56 240 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 EXOSC8Q96B26 276 aaKnown RBP10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CTHRC1Q96CG8 243 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 FCRL1Q96LA6 429 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CENPHQ9H3R5 247 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms