RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 HNRNPA3P51991 378 aaKnown RBP2.57□□□□□ -2
SCFD1-216ENST00000555550 ZNF133P52736 654 aaPredicted RBP2.57□□□□□ -2
SCFD1-216ENST00000555550 SLC12A3P55017 1021 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 BFSP1Q12934 665 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ANKRD20A4Q4UJ75 823 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ANKRD20A8PQ5CZ79 823 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 CT45A2Q5DJT8 189 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 MS4A13Q5J8X5 152 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ANKRD20A2Q5SQ80 823 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ANKRD20A1Q5TYW2 823 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ANKRD20A3Q5VUR7 823 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 RTL6Q6ICC9 239 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 IGFL3Q6UXB1 125 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 GBP6Q6ZN66 633 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 LINC00518Q8N0U6 118 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 CLYBLQ8N0X4 340 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 OR6M1Q8NGM8 313 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 OR4L1Q8NH43 312 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 UBTD2Q8WUN7 234 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 TFB1MQ8WVM0 346 aaKnown RBP2.57□□□□□ -2
SCFD1-216ENST00000555550 HAS2Q92819 552 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 SLCO4A1Q96BD0 722 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 COG3Q96JB2 828 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ZMAT2Q96NC0 199 aaKnown RBP2.57□□□□□ -2
SCFD1-216ENST00000555550 C19orf43Q9BQ61 176 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 TRIM9Q9C026 710 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 SLC26A1Q9H2B4 701 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ZDHHC6Q9H6R6 413 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 DNAJC17Q9NVM6 304 aaKnown RBP2.57□□□□□ -2
SCFD1-216ENST00000555550 RPS6KB2Q9UBS0 482 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 DNAJB9Q9UBS3 223 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 ATG4BQ9Y4P1 393 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 FGD5Q6ZNL6 1462 aa2.57□□□□□ -2
SCFD1-216ENST00000555550 STBD1O95210 358 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 IGHV3-9P01782 118 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 FCER2P06734 321 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 ACP1P24666 158 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 XCR1P46094 333 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 TKTL1P51854 596 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 GEMP55040 296 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 UCNP55089 124 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 WNT4P56705 351 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 MPPE1Q53F39 396 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 TCHHL1Q5QJ38 904 aaPredicted RBP2.56□□□□□ -2
SCFD1-216ENST00000555550 CELF3Q5SZQ8 465 aaKnown RBP2.56□□□□□ -2
SCFD1-216ENST00000555550 SEL1L2Q5TEA6 688 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 TAF3Q5VWG9 929 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 RHBDD2Q6NTF9 364 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 CD164L2Q6UWJ8 174 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 MFSD7Q6UXD7 560 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 TIFABQ6ZNK6 161 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 ERICH1Q86X53 443 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 UNC5CLQ8IV45 518 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 GPR137CQ8N3F9 429 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 ZNF799Q96GE5 643 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 FAM173AQ9BQD7 235 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 NTMT1Q9BV86 223 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 DCTPP1Q9H773 170 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 DNAJC11Q9NVH1 559 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 TERF2IPQ9NYB0 399 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 CCPG1Q9ULG6 757 aa2.56□□□□□ -2
SCFD1-216ENST00000555550 G3V3Y1 287 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 SLC33A1O00400 549 aaPredicted RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 TXNDC12O95881 172 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 IGKV3-11P04433 115 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 CPN1P15169 458 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 RPA1P27694 616 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 RPS8P62241 208 aaKnown RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 STX1AQ16623 288 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 PAGE2BQ5JRK9 111 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 SLC22A10Q63ZE4 541 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 ASRGL1Q7L266 308 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 GALNTL5Q7Z4T8 443 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 GPR142Q7Z601 462 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 ZNF677Q86XU0 584 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 OR8H3Q8N146 312 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 OR13F1Q8NGS4 319 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 SETD7Q8WTS6 366 aaKnown RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 FRAT1Q92837 279 aaPredicted RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 FAM46BQ96A09 425 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 FAM122AQ96E09 287 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 CAPNS2Q96L46 248 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 KIR2DL4Q99706 377 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 FUNDC2Q9BWH2 189 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 ISG20L2Q9H9L3 353 aaKnown RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 RNPEPL1Q9HAU8 725 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 ZCCHC17Q9NP64 241 aaKnown RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 MIEF1Q9NQG6 463 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 DPM3Q9P2X0 92 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 EMCNQ9ULC0 261 aa2.55□□□□□ -2
SCFD1-216ENST00000555550 DIMT1Q9UNQ2 313 aaKnown RBP2.55□□□□□ -2
SCFD1-216ENST00000555550 KIF7Q2M1P5 1343 aa2.54□□□□□ -2
SCFD1-216ENST00000555550 PDXKO00764 312 aa2.54□□□□□ -2
SCFD1-216ENST00000555550 CYB561D2O14569 222 aa2.54□□□□□ -2
SCFD1-216ENST00000555550 STX6O43752 255 aa2.54□□□□□ -2
SCFD1-216ENST00000555550 PROS1P07225 676 aa2.54□□□□□ -2
SCFD1-216ENST00000555550 HSP90AB1P08238 724 aaKnown RBP2.54□□□□□ -2
SCFD1-216ENST00000555550 ZNF32P17041 273 aa2.54□□□□□ -2
SCFD1-216ENST00000555550 IL2RGP31785 369 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms