RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OR1K1Q8NGR3 316 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 POM121L2Q96KW2 1035 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 AGAP3Q96P47 875 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 SYT11Q9BT88 431 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
VRK1-205ENST00000555402 PARLQ9H300 379 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 NT5DC2Q9H857 520 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 MOB1AQ9H8S9 216 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 ACTR8Q9H981 624 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 VAT1LQ9HCJ6 419 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 TAS2R16Q9NYV7 291 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 THYN1Q9P016 225 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 EPS15L1Q9UBC2 864 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 TUBGCP4Q9UGJ1 667 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 MGAT4AQ9UM21 535 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 MGAT4BQ9UQ53 548 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 FKBP7Q9Y680 259 aa4.44□□□□□ -1.7
VRK1-205ENST00000555402 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.44□□□□□ -1.7
VRK1-205ENST00000555402 IGHV4-30-2A0A087WSY4 118 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 TRGV8A0A0C4DH27 118 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 TRBV5-4A0A0C4DH59 114 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 FAM230AA0A1W2PPH8 454 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 NOL3O60936 208 aaKnown RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 DIRAS3O95661 229 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 NCF1P14598 390 aaPredicted RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 GP9P14770 177 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 CYP11B1P15538 503 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 CAPGP40121 348 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 RIDAP52758 137 aaKnown RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 RAG2P55895 527 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 IRX1P78414 480 aaPredicted RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 GSTO1P78417 241 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 SRPXP78539 464 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 ZNF146Q15072 292 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 MUC21Q5SSG8 566 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 ARSKQ6UWY0 536 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 GOLGA7Q7Z5G4 137 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 GPR142Q7Z601 462 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 AMZ2Q86W34 360 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 FAM131BQ86XD5 332 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 MISPQ8IVT2 679 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 Q8NBF4 154 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 MINDY2Q8NBR6 621 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 GTF3AQ92664 365 aaKnown RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 NCLNQ969V3 563 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 PNPLA2Q96AD5 504 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 LINC00479Q96M42 142 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 PRICKLE1Q96MT3 831 aaPredicted RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 TRIM51Q9BSJ1 452 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 LIME1Q9H400 295 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 ECT2Q9H8V3 914 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 THAP10Q9P2Z0 257 aaPredicted RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 ZNF490Q9ULM2 529 aaPredicted RBP4.43□□□□□ -1.7
VRK1-205ENST00000555402 KLHDC2Q9Y2U9 406 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 KIF3AQ9Y496 699 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 SMAD5-AS1Q9Y6J3 95 aa4.43□□□□□ -1.7
VRK1-205ENST00000555402 ANKRD30BLA7E2S9 258 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 ARHGEF33A8MVX0 844 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 BUB1O43683 1085 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 TOM1L1O75674 476 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 POP4O95707 220 aaKnown RBP4.42□□□□□ -1.7
VRK1-205ENST00000555402 OR9G9P0C7N8 305 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 TRIM23P36406 574 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
VRK1-205ENST00000555402 NOP14P78316 857 aaKnown RBP4.42□□□□□ -1.7
VRK1-205ENST00000555402 KLHL30Q0D2K2 578 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 NFATC2Q13469 925 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 ENPP2Q13822 863 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 HAGHQ16775 308 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 UNC50Q53HI1 259 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 AGAP7PQ5VUJ5 663 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 AFTPHQ6ULP2 937 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 LUZP1Q86V48 1076 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 CENPSQ8N2Z9 138 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 CERS5Q8N5B7 392 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 BCORP1Q8N888 145 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 ZNF781Q8N8C0 355 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 SAMD12Q8N8I0 201 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 OR4F5Q8NH21 305 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 WDR36Q8NI36 951 aaKnown RBP4.42□□□□□ -1.7
VRK1-205ENST00000555402 CHPT1Q8WUD6 406 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 PTPRUQ92729 1446 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 C11orf52Q96A22 123 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 SLC45A3Q96JT2 553 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 CAPNS2Q96L46 248 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 IWS1Q96ST2 819 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 ELL3Q9HB65 397 aaPredicted RBP4.42□□□□□ -1.7
VRK1-205ENST00000555402 GDAP2Q9NXN4 497 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 GTSE1Q9NYZ3 720 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 ASIC3Q9UHC3 531 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 IKZF3Q9UKT9 509 aa4.42□□□□□ -1.7
VRK1-205ENST00000555402 NCAPD2Q15021 1401 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 A0A0J9YVX5 310 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 A8MXK9 166 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 F8WDY8 70 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 EI24O14681 340 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 NDC80O14777 642 aa4.41□□□□□ -1.7
VRK1-205ENST00000555402 SNAP91O60641 907 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms