RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 BORAQ6PGQ7 559 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF551Q7Z340 670 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-219ENST00000555323 OR2L13Q8N349 312 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 VWA5B2Q8N398 1253 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 ADCY4Q8NFM4 1077 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 GOT1L1Q8NHS2 421 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-219ENST00000555323 NCLNQ969V3 563 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 OR52E6Q96RD3 313 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 NUDT9Q9BW91 350 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 TRIM4Q9C037 500 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 OR8D2Q9GZM6 311 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 LHPPQ9H008 270 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 SIRT3Q9NTG7 399 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-219ENST00000555323 RYDENQ9NUL5 291 aaKnown RBP11.8□□□□□ -0.52
SYNE2-219ENST00000555323 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.8□□□□□ -0.52
SYNE2-219ENST00000555323 CCDC167Q9P0B6 97 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 PTGFRNQ9P2B2 879 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 C19orf53Q9UNZ5 99 aaPredicted RBP11.8□□□□□ -0.52
SYNE2-219ENST00000555323 ERVK-19Q9WJR5 959 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 ARL2BPQ9Y2Y0 163 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 CROCCQ5TZA2 2017 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 ACACBO00763 2458 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 PTPRQQ9UMZ3 2332 aa11.8□□□□□ -0.52
SYNE2-219ENST00000555323 TMEM200CA6NKL6 621 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 OR6C76A6NM76 312 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 UPK1AO00322 258 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CDK2AP1O14519 115 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 DNAJB5O75953 348 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 ZFAND5O76080 213 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 PSMG1O95456 288 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 C6orf47O95873 294 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CBX7O95931 251 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CELA2AP08217 269 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 ITGAMP11215 1152 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CD1EP15812 388 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 SSTR4P31391 388 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 HBA1P69905 142 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 MRPS35P82673 323 aaKnown RBP11.79□□□□□ -0.52
SYNE2-219ENST00000555323 KLF10Q13118 480 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 TLR1Q15399 786 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 ST3GAL2Q16842 350 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 AGKQ53H12 422 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 TMEM64Q6YI46 380 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF321PQ8N8H1 164 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 OR7G2Q8NG99 324 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 NUBPLQ8TB37 319 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 THOC3Q96J01 351 aaKnown RBP11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CCDC115Q96NT0 180 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CNPPD1Q9BV87 410 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 NMUR2Q9GZQ4 415 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 MYLK2Q9H1R3 596 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 OR10A5Q9H207 317 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 NEUROD4Q9HD90 331 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 SERHLQ9NQF3 203 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 TAS2R9Q9NYW1 312 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 COPS7AQ9UBW8 275 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 CFL2Q9Y281 166 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 LOC400499M0QZD8 3231 aa11.79□□□□□ -0.52
SYNE2-219ENST00000555323 A0A1W2PP18 115 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 C9JVG2 144 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 CFLARO15519 480 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 PTGER1P34995 402 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 MC3RP41968 323 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 EMDP50402 254 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 CDK9P50750 372 aaKnown RBP11.78□□□□□ -0.52
SYNE2-219ENST00000555323 CCL11P51671 97 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 KCNK10P57789 538 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 RNF4P78317 190 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 HSPB3Q12988 150 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 DUSP8Q13202 625 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 C6orf163Q5TEZ5 329 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 GKAP1Q5VSY0 366 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-219ENST00000555323 HSDL2Q6YN16 418 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 RNF111Q6ZNA4 994 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 MTDHQ86UE4 582 aaKnown RBP11.78□□□□□ -0.52
SYNE2-219ENST00000555323 CLECL1Q8IZS7 167 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 LGI4Q8N135 537 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 KIF2BQ8N4N8 673 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 SIMC1Q8NDZ2 872 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 C17orf47Q8NEP4 570 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 OR5L2Q8NGL0 311 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 DOK4Q8TEW6 326 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 HOXB13Q92826 284 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-219ENST00000555323 KAT2AQ92830 837 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 TP53INP1Q96A56 240 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 SPDL1Q96EA4 605 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 CRELD1Q96HD1 420 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 LMF1Q96S06 567 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 CCDC106Q9BWC9 280 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 ZNF552Q9H707 407 aaPredicted RBP11.78□□□□□ -0.52
SYNE2-219ENST00000555323 PCDHGB4Q9UN71 923 aa11.78□□□□□ -0.52
SYNE2-219ENST00000555323 PCDHGA9Q9Y5G4 932 aaKnown RBP11.78□□□□□ -0.52
SYNE2-219ENST00000555323 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 TRBV11-1A0A0K0K1C0 115 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 CCDC154A6NI56 674 aa11.77□□□□□ -0.53
SYNE2-219ENST00000555323 FCHO1O14526 889 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms