RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 OR10A5Q9H207 317 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 SLC35C2Q9NQQ7 365 aa11.21□□□□□ -0.61
SRP54-206ENST00000555317 RYDENQ9NUL5 291 aaKnown RBP11.21□□□□□ -0.61
SRP54-206ENST00000555317 RELNP78509 3460 aa11.21□□□□□ -0.62
SRP54-206ENST00000555317 COL12A1Q99715 3063 aa11.21□□□□□ -0.62
SRP54-206ENST00000555317 HECTD1Q9ULT8 2610 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 TMEM120BA0PK00 339 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 TMEM200CA6NKL6 621 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 CAPN14A8MX76 684 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 TFECO14948 347 aaPredicted RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 BCAS2O75934 225 aaPredicted RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 AGFG2O95081 481 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 CBX6O95503 412 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 P04436 131 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 BGNP21810 368 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 ASMTP46597 345 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 TMED10P49755 219 aaKnown RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 MEOX1P50221 254 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 NCBP2P52298 156 aaKnown RBP eCLIP11.2□□□□□ -0.62
SRP54-206ENST00000555317 ABCE1P61221 599 aaKnown RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 SRSF11Q05519 484 aaKnown RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 RBPJQ06330 500 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 FUT7Q11130 342 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 EBPQ15125 230 aaKnown RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 PIGGQ5H8A4 983 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 FAM180BQ6P0A1 224 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 GFRALQ6UXV0 394 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 TICAM1Q8IUC6 712 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 CCDC116Q8IYX3 515 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 FAM9CQ8IZT9 166 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 POGLUT1Q8NBL1 392 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 PSD4Q8NDX1 1056 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 FAM13CQ8NE31 585 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 C11orf24Q96F05 449 aaPredicted RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 CNRIP1Q96F85 164 aaPredicted RBP11.2□□□□□ -0.62
SRP54-206ENST00000555317 SLX1AQ9BQ83 275 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 TMBIM4Q9HC24 238 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 SACM1LQ9NTJ5 587 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 SEC14L3Q9UDX4 400 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 PRODH2Q9UF12 536 aa11.2□□□□□ -0.62
SRP54-206ENST00000555317 ASH1LQ9NR48 2969 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 NPIPB8E9PQR5 432 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 ACOT7O00154 380 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 LSM1O15116 133 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 PEX1O43933 1283 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 LYPLA1O75608 230 aaPredicted RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 CT62P0C5K7 136 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 DHRS4L1P0CG22 281 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 HPCAL1P37235 193 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 SLC1A6P48664 564 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 NR0B1P51843 470 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 GPR85P60893 370 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 PLGLB1Q02325 96 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 MAP4K2Q12851 820 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 STX3Q13277 289 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 EXOSC7Q15024 291 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 LTB4RQ15722 352 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 PRICKLE4Q2TBC4 344 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 EIF2S3LQ2VIR3 472 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 FAM71E1Q6IPT2 247 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 GK5Q6ZS86 529 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 HDXQ7Z353 690 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 MDGA2Q7Z553 956 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 SULF2Q8IWU5 870 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 TRIM42Q8IWZ5 723 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 FAM26EQ8N5C1 309 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 CPSF7Q8N684 471 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 GOLM1Q8NBJ4 401 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 OR9A2Q8NGT5 310 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 OR2T11Q8NH01 316 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 C16orf52Q8NHV5 167 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 ZNF675Q8TD23 568 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 GFM2Q969S9 779 aaKnown RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 TUBGCP3Q96CW5 907 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 ERP27Q96DN0 273 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 SPACA9Q96E40 222 aaPredicted RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 FRMD6Q96NE9 622 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 TUBB1Q9H4B7 451 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 MAT2BQ9NZL9 334 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 ZDHHC2Q9UIJ5 367 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 CCL27Q9Y4X3 112 aa11.19□□□□□ -0.62
SRP54-206ENST00000555317 USP9YO00507 2555 aaPredicted RBP11.19□□□□□ -0.62
SRP54-206ENST00000555317 ASPDHA6ND91 283 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 NPIPA5E9PKD4 350 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 TP53I11O14683 189 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 PDPK1O15530 556 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 AKAP10O43572 662 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 PEX11AO75192 247 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 SLITRK5O94991 958 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 UNC5CO95185 931 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 LRATO95237 230 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 CLPSP04118 112 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 PCSK2P16519 638 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 PTGER1P34995 402 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 RPL14P50914 215 aaKnown RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 CASP6P55212 293 aa11.18□□□□□ -0.62
SRP54-206ENST00000555317 RPP38P78345 283 aaKnown RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 MRPS35P82673 323 aaKnown RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 MAD2L1Q13257 205 aaPredicted RBP11.18□□□□□ -0.62
SRP54-206ENST00000555317 MPP2Q14168 576 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms