RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 KCNK12Q9HB15 430 aa14.04□□□□□ -0.16
XRCC3-211ENST00000555055 MRPS30Q9NP92 439 aaKnown RBP14.04□□□□□ -0.16
XRCC3-211ENST00000555055 WASH6PQ9NQA3 447 aa14.04□□□□□ -0.16
XRCC3-211ENST00000555055 CTPS2Q9NRF8 586 aa14.04□□□□□ -0.16
XRCC3-211ENST00000555055 PCDHGA3Q9Y5H0 932 aa14.04□□□□□ -0.16
XRCC3-211ENST00000555055 AP1M2Q9Y6Q5 423 aa14.04□□□□□ -0.16
XRCC3-211ENST00000555055 TDRD6O60522 2096 aaKnown RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SPTBP11277 2137 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 ISM1B1AKI9 464 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 M0R082 166 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 BTN3A3O00478 584 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 ZW10O43264 779 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 NDUFB5O43674 189 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 PCDHGA12O60330 932 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 TPST2O60704 377 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 RECKO95980 971 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 C9P02748 559 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 CXCR2P25025 360 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SEPHS1P49903 392 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 NUDT6P53370 316 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 DSTNP60981 165 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 EEF1A2Q05639 463 aaKnown RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 NDUFAF5Q5TEU4 345 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 C18orf63Q68DL7 685 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 TRIM40Q6P9F5 258 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 FAM83FQ8NEG4 500 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SLC38A5Q8WUX1 472 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 APH1BQ8WW43 257 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SIPA1Q96FS4 1042 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 HRASLS5Q96KN8 279 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 NLNQ9BYT8 704 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 TMEM168Q9H0V1 697 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 RHBGQ9H310 441 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 PSORS1C1Q9UIG5 152 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 CERS1P27544 350 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 DDOSTP39656 456 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 FEN1P39748 380 aaKnown RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 HTR3AP46098 478 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 IDH2P48735 452 aaKnown RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 CHRNEQ04844 493 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 NPRL3Q12980 569 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 LRRC32Q14392 662 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 GPR19Q15760 415 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 RPE65Q16518 533 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SYPL1Q16563 259 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 NUDT13Q86X67 352 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 UBQLNLQ8IYU4 475 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 ASCC1Q8N9N2 400 aaKnown RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 CREB3L4Q8TEY5 395 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 CXorf40BQ96DE9 158 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 TMEM19Q96HH6 336 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 C6orf62Q9GZU0 229 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SIRT3Q9NTG7 399 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-211ENST00000555055 AHSPQ9NZD4 102 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 ACSL5Q9ULC5 683 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 CORO2BQ9UQ03 480 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 SLC17A4Q9Y2C5 497 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 KLK4Q9Y5K2 254 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 N6AMT1Q9Y5N5 214 aa14.03□□□□□ -0.16
XRCC3-211ENST00000555055 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 TRBC2A0A5B9 178 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 PRSS38A1L453 326 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 LRIT2A6NDA9 550 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 PPIBP23284 216 aaKnown RBP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 NKX2-5P52952 324 aaPredicted RBP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 OLR1P78380 273 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 PUM1Q14671 1186 aaKnown RBP eCLIP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 ARHGAP19Q14CB8 494 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 TEAD4Q15561 434 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 TIGD6Q17RP2 521 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 LEXMQ3ZCV2 418 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 IFI44LQ53G44 452 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 AHSA2Q719I0 299 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 C6orf120Q7Z4R8 191 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 CCDC190Q86UF4 302 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 COMTD1Q86VU5 262 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 Q8N9G6 341 aaPredicted RBP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 KCT2Q8NC54 265 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 OR7G1Q8NGA0 311 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 COPS4Q9BT78 406 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 QRSL1Q9H0R6 528 aaKnown RBP14.02□□□□□ -0.16
XRCC3-211ENST00000555055 PELI2Q9HAT8 420 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 ATG4BQ9Y4P1 393 aa14.02□□□□□ -0.16
XRCC3-211ENST00000555055 WDFY4Q6ZS81 3184 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 PRAMEF27A3QJZ7 478 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 CACNB4O00305 520 aaPredicted RBP14.02□□□□□ -0.17
XRCC3-211ENST00000555055 SEMA7AO75326 666 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 OR12D1P0DN82 309 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 GADD45AP24522 165 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 GPC1P35052 558 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 TGFBR1P36897 503 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 HYAL2Q12891 473 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 OR4C11Q6IEV9 310 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 KLHL17Q6TDP4 642 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 ENTHD1Q8IYW4 607 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 CCDC116Q8IYX3 515 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 LGI4Q8N135 537 aa14.02□□□□□ -0.17
XRCC3-211ENST00000555055 OR10G2Q8NGC3 310 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms