RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 REXO4Q9GZR2 422 aaKnown RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 DSN1Q9H410 356 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 THUMPD1Q9NXG2 353 aaKnown RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 ERVK-18Q9QC07 812 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 SPASTQ9UBP0 616 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 PSORS1C1Q9UIG5 152 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 PPT2Q9UMR5 302 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CFL2Q9Y281 166 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 DLGAP4Q9Y2H0 992 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 TSC22D4Q9Y3Q8 395 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 ZNF451Q9Y4E5 1061 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 MAGED1Q9Y5V3 778 aaPredicted RBP10.54□□□□□ -0.72
SRP54-205ENST00000554803 HS3ST3A1Q9Y663 406 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 CSNK1G3Q9Y6M4 447 aa10.54□□□□□ -0.72
SRP54-205ENST00000554803 SHANK1Q9Y566 2161 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 PDZD2O15018 2839 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 TTC36A6NLP5 189 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 CLCA1A8K7I4 914 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 SCAMP2O15127 329 aaKnown RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 SLC31A1O15431 190 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 AQP9O43315 295 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 SCN2BO60939 215 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 CSF2P04141 144 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 TFPTP0C1Z6 253 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 ELFN1P0C7U0 828 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 PIPP12273 146 aaPredicted RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 EPORP19235 508 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 HNRNPA2B1P22626 353 aaKnown RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 ETV3P41162 512 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 GSTM5P46439 218 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 IST1P53990 364 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 RPS21P63220 83 aaKnown RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 NR0B2Q15466 257 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 CYP2A13Q16696 494 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 ZNF542PQ5EBM4 170 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 SLX4IPQ5VYV7 408 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 KIAA1161Q6NSJ0 714 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 DNAJC14Q6Y2X3 702 aaPredicted RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 Q6ZVL8 140 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 TECPR1Q7Z6L1 1165 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 KRT73Q86Y46 540 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 PHACTR4Q8IZ21 702 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 CNIH3Q8TBE1 160 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 SETD6Q8TBK2 473 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 CXorf40AQ8TE69 158 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 NAT6Q93015 286 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 RAB7BQ96AH8 199 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 COQ8BQ96D53 544 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 C11orf24Q96F05 449 aaPredicted RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 HSH2DQ96JZ2 352 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 C7orf34Q96L11 122 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 DUSP26Q9BV47 211 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 DCSTAMPQ9H295 470 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 TMEM38AQ9H6F2 299 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 ZNF556Q9HAH1 456 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 TPT1P8Q9HAU6 139 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 GPR27Q9NS67 375 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 CRNNQ9UBG3 495 aaPredicted RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 ATP6V1HQ9UI12 483 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 ZFR2Q9UPR6 939 aaKnown RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 RNF6Q9Y252 685 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 FAM32AQ9Y421 112 aaKnown RBP10.53□□□□□ -0.72
SRP54-205ENST00000554803 MTORP42345 2549 aa10.53□□□□□ -0.72
SRP54-205ENST00000554803 A0A1W2PQU0 124 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 IGLON5A6NGN9 336 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 AGAP5A6NIR3 686 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 METTL15A6NJ78 407 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 MYO1GB0I1T2 1018 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 TMX2-CTNND1H3BSU7 103 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 FOXE1O00358 373 aaPredicted RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 XPNPEP2O43895 674 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 AIREO43918 545 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SLCO2B1O94956 709 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 AGFG2O95081 481 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 PCDH8O95206 1070 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 KRT75O95678 551 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 APOA1P02647 267 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 CATP04040 527 aaKnown RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 CDK1P06493 297 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 BMP4P12644 408 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ATP1B2P14415 290 aaPredicted RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 NME1P15531 152 aaKnown RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 S100A1P23297 94 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 TGFBR2P37173 567 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 GDF5P43026 501 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 EIF2B2P49770 351 aaKnown RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 MLLT10P55197 1068 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 CDC42P60953 191 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 SELENOWP63302 87 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 RPP38P78345 283 aaKnown RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 IRF8Q02556 426 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 LAPTM5Q13571 262 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 FGL2Q14314 439 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 BCL2A1Q16548 175 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 ZNF630Q2M218 657 aaPredicted RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 DEFB133Q30KQ1 61 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 C18orf21Q32NC0 220 aaPredicted RBP10.52□□□□□ -0.73
SRP54-205ENST00000554803 PTCHD3Q3KNS1 767 aa10.52□□□□□ -0.73
SRP54-205ENST00000554803 IFI44LQ53G44 452 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms