RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ACSM4P0C7M7 580 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SLC2A4P14672 509 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CD36P16671 472 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 NDUFB7P17568 137 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ACVR2AP27037 513 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 DCKP27707 260 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 IL1R2P27930 398 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CASP1P29466 404 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ADORA1P30542 326 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 HOXC8P31273 242 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TLX1P31314 330 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 AKT1P31749 480 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SERPINF1P36955 418 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 HSD17B3P37058 310 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 HPCAL1P37235 193 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CAPGP40121 348 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ALDH3B1P43353 468 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 NSFP46459 744 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 RABIFP47224 123 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CLCNKAP51800 687 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 NDST2P52849 883 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CRYBB1P53674 252 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ARSFP54793 590 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SELENOVP59797 346 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PRPS1P60891 318 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 YWHAGP61981 247 aaKnown RBP eCLIP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 HSF2Q03933 536 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PIGFQ07326 219 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 GALNT2Q10471 571 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ORC2Q13416 577 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 IL10RAQ13651 578 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 THOC5Q13769 683 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PIGHQ14442 188 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 KCNJ11Q14654 390 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SYT16Q17RD7 645 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PNLIPRP3Q17RR3 467 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SLC5A12Q1EHB4 618 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TCTN1Q2MV58 587 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 MOGAT2Q3SYC2 334 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 GPR33Q49SQ1 333 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ATP13A5Q4VNC0 1218 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ARHGAP40Q5TG30 622 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 LCN1P1Q5VSP4 162 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PRAMEF20Q5VT98 475 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 AGAP6Q5VW22 663 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 BSPRYQ5W0U4 402 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ARL6IP4Q66PJ3 421 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SLC25A25Q6KCM7 469 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SLC27A4Q6P1M0 643 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TAF2Q6P1X5 1199 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 RAD9BQ6WBX8 426 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF66Q6ZN08 573 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PAGE2Q7Z2X7 111 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM17Q86X19 198 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TMC8Q8IU68 726 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 UBALD2Q8IYN6 164 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SPAG16Q8N0X2 631 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF786Q8N393 782 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZCCHC7Q8N3Z6 543 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 MRPL43Q8N983 215 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 WDSUB1Q8N9V3 476 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SYT14Q8NB59 555 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TSPAN14Q8NG11 270 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 OR1M1Q8NGA1 313 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 OR6F1Q8NGZ6 308 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 BBS10Q8TAM1 723 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZFAND1Q8TCF1 268 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 LKAAEAR1Q8TD35 194 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ACTRT1Q8TDG2 376 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CD300LFQ8TDQ1 290 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 RSC1A1Q92681 617 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 NT5C3BQ969T7 300 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ISG20Q96AZ6 181 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 S100PBPQ96BU1 408 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 C12orf43Q96C57 262 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 NSUN4Q96CB9 384 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ISOC1Q96CN7 298 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 R3HDM4Q96D70 268 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZHX1-C8orf76Q96EF9 292 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 FEM1CQ96JP0 617 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 C5orf34Q96MH7 638 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF48Q96MX3 618 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 AGAP4Q96P64 663 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 TRIB1Q96RU8 372 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PFDN5Q99471 154 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZBTB18Q99592 522 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF559Q9BR84 538 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 CADM1Q9BY67 442 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 PARD6GQ9BYG4 376 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 OSBPL8Q9BZF1 889 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 GPR63Q9BZJ6 419 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 THAP2Q9H0W7 228 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 MFSD1Q9H3U5 465 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 SMOC2Q9H3U7 446 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 ESRP2Q9H6T0 727 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 KAT8Q9H7Z6 458 aaKnown RBP4.18□□□□□ -1.74
ATXN3-227ENST00000554491 MAGEF1Q9HAY2 307 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 KLHL28Q9NXS3 571 aa4.18□□□□□ -1.74
ATXN3-227ENST00000554491 NDUFAF4Q9P032 175 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms