RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 OR4N4Q8N0Y3 316 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 CHCHD4Q8N4Q1 142 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 OR2T11Q8NH01 316 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 HUS1BQ8NHY5 278 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 TBC1D15Q8TC07 691 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF473Q8WTR7 871 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SELENOMQ8WWX9 145 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 UBE2E3Q969T4 207 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 MTFMTQ96DP5 389 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 TM4SF19Q96DZ7 209 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 MARS2Q96GW9 593 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 FAR2Q96K12 515 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 C3orf30Q96M34 536 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF285Q96NJ3 590 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 FRG2BQ96QU4 278 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 OR2A5Q96R48 311 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 HBEGFQ99075 208 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 MTERF1Q99551 399 aaKnown RBP5.96□□□□□ -1.46
SCFD1-212ENST00000554486 MACROD1Q9BQ69 325 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 NUF2Q9BZD4 464 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ACPTQ9BZG2 426 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ELOVL6Q9H5J4 265 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 RABEP2Q9H5N1 569 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 MEAF6Q9HAF1 191 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 KCNK13Q9HB14 408 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 PDE7BQ9NP56 450 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SOHLH2Q9NX45 425 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 CCL27Q9Y4X3 112 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 USH1CQ9Y6N9 552 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 AP1M2Q9Y6Q5 423 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 SCN2AQ99250 2005 aa5.96□□□□□ -1.46
SCFD1-212ENST00000554486 ANKDD1BA6NHY2 528 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 C4orf51C9J302 202 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 SLCO1B7G3V0H7 640 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 H3BMH7 237 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 SH3BGRLO75368 114 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 MT-CO3P00414 261 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 HSD3B1P14060 373 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 SERPINB1P30740 379 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 CCKBRP32239 447 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 NOVA1P51513 510 aaKnown RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 VSX2P58304 361 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 RPS13P62277 151 aaKnown RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 HSD11B2P80365 405 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 SIM1P81133 766 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 HMGCS1Q01581 520 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF33BQ06732 778 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 CSTF3Q12996 717 aaKnown RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 TRA2AQ13595 282 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 DDX39BQ13838 428 aaKnown RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 PRTGQ2VWP7 1150 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 SLC9B1Q4ZJI4 515 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 KHDC1LQ5JSQ8 128 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 C10orf62Q5T681 223 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 CROCCQ5TZA2 2017 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 RNF220Q5VTB9 566 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 EPGNQ6UW88 154 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 Q6ZSR9 355 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 PDSS2Q86YH6 399 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 DDIASQ8IXT1 998 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 TBC1D19Q8N5T2 526 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 Q8NA96 180 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 TRPV3Q8NET8 790 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 TTLQ8NG68 377 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 NT5CQ8TCD5 201 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 C10orf82Q8WW14 230 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 REPS1Q96D71 796 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 C19orf60Q96EN9 201 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 ZNF503Q96F45 646 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 MAELQ96JY0 434 aaKnown RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 PPP1R36Q96LQ0 422 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 F2RL3Q96RI0 385 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 ELAC2Q9BQ52 826 aaKnown RBP5.95□□□□□ -1.46
SCFD1-212ENST00000554486 EBF4Q9BQW3 602 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 MS4A8Q9BY19 250 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 FAM107BQ9H098 131 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 OR51B5Q9H339 312 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 KLHL31Q9H511 634 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 BRF2Q9HAW0 419 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 GPR35Q9HC97 309 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 SLAMF7Q9NQ25 335 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 PSD3Q9NYI0 1048 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 GIMAP2Q9UG22 337 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 ZDHHC8Q9ULC8 765 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 PLCL2Q9UPR0 1127 aa5.95□□□□□ -1.46
SCFD1-212ENST00000554486 GOLGA8QA0A0J9YX86 632 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 ATP6AP2A0A1C7CYW4 349 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 A0A1W2PNU3 283 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 GOLGA8OA6NCC3 632 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 LRIT2A6NDA9 550 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TRPC5OSA6NMA1 111 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 MARCH11A6NNE9 402 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM150CB9EJG8 249 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 NPIPB8E9PQR5 432 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 GOLGA8NF8WBI6 632 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SLC28A1O00337 649 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 LSM1O15116 133 aaKnown RBP5.94□□□□□ -1.46
SCFD1-212ENST00000554486 NDUFS4O43181 175 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SNX3O60493 162 aa5.94□□□□□ -1.46
SCFD1-212ENST00000554486 SRPX2O60687 465 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms