RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 SYNDIG1LA6NDD5 238 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 SLC22A3O75751 556 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 ITGAMP11215 1152 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 PCSK2P16519 638 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NT5EP21589 574 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NTSP30990 170 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 SSTR4P31391 388 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 RPL3P39023 403 aaKnown RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 CASRP41180 1078 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 CDK9P50750 372 aaKnown RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 PGDP52209 483 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NCBP2P52298 156 aaKnown RBP eCLIP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 HSPB3Q12988 150 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 BIKQ13323 160 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 UBAP2LQ14157 1087 aaKnown RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 SQLEQ14534 574 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 ZNF267Q14586 743 aaPredicted RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 RPS6KA2Q15349 733 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 BTBD16Q32M84 506 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 PGS1Q32NB8 556 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 TRMT12Q53H54 448 aaKnown RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 FHL5Q5TD97 284 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 METTL21CQ5VZV1 264 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 GALNT12Q8IXK2 581 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 SAMD14Q8IZD0 417 aaPredicted RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 CLECL1Q8IZS7 167 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 TMEM102Q8N9M5 508 aaPredicted RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 OR7G2Q8NG99 324 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 ZNF675Q8TD23 568 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 PSMF1Q92530 271 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 KAT2AQ92830 837 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 RIT1Q92963 219 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NCLNQ969V3 563 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 RBM18Q96H35 190 aaKnown RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 FBXL20Q96IG2 436 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 CCT8L2Q96SF2 557 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 CNPPD1Q9BV87 410 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NUDT9Q9BW91 350 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 BHLHE41Q9C0J9 482 aaPredicted RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 OR8D2Q9GZM6 311 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NMUR2Q9GZQ4 415 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 ING2Q9H160 280 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 SAR1AQ9NR31 198 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 SIRT3Q9NTG7 399 aaPredicted RBP16.02■□□□□ 0.16
TUBB3-205ENST00000554336 GIMAP4Q9NUV9 329 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 ZNF639Q9UID6 485 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 CLCA3PQ9Y6N3 262 aa16.02■□□□□ 0.16
TUBB3-205ENST00000554336 NAV2Q8IVL1 2488 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 TNRC6AQ8NDV7 1962 aaKnown RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 ASPDHA6ND91 283 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 K7EM74 188 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 PRKNO60260 465 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 NME6O75414 186 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 CBX7O95931 251 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 TNNI3P19429 210 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 CAPN3P20807 821 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 MC3RP41968 323 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 KIR3DL1P43629 444 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 STX1BP61266 288 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 FUT7Q11130 342 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 MAP4K2Q12851 820 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 RCAN2Q14206 197 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 EXOSC7Q15024 291 aaKnown RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 DPY19L1Q2PZI1 675 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 ANKRD46Q86W74 232 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 APLFQ8IW19 511 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 VWA5B2Q8N398 1253 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 CPSF7Q8N684 471 aaKnown RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 MORN4Q8NDC4 146 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 ELP5Q8TE02 316 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 DAZLQ92904 295 aaKnown RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 SENP5Q96HI0 755 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 FER1L6-AS2Q96M78 137 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 NPAS2Q99743 824 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 MMP25Q9NPA2 562 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 ACSS1Q9NUB1 689 aaPredicted RBP16.01■□□□□ 0.15
TUBB3-205ENST00000554336 ANAPC2Q9UJX6 822 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 TRIM33Q9UPN9 1127 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 MAPRE3Q9UPY8 281 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 TP53TG5Q9Y2B4 290 aa16.01■□□□□ 0.15
TUBB3-205ENST00000554336 C6orf47O95873 294 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 FAM107AO95990 144 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 SERPINA7P05543 415 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 PGRP06401 933 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 MPIP34949 423 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 POLR2JP52435 117 aaKnown RBP16■□□□□ 0.15
TUBB3-205ENST00000554336 FOXK1P85037 733 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 SRSF11Q05519 484 aaKnown RBP16■□□□□ 0.15
TUBB3-205ENST00000554336 SRSF1Q07955 248 aaKnown RBP eCLIP16■□□□□ 0.15
TUBB3-205ENST00000554336 AIMP2Q13155 320 aaKnown RBP16■□□□□ 0.15
TUBB3-205ENST00000554336 EXT1Q16394 746 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 TIGD2Q4W5G0 525 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 LACTB2Q53H82 288 aaPredicted RBP16■□□□□ 0.15
TUBB3-205ENST00000554336 BLOC1S3Q6QNY0 202 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 TMEM107Q6UX40 140 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 GK5Q6ZS86 529 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 C9orf40Q8IXQ3 194 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 ZNF615Q8N8J6 731 aa16■□□□□ 0.15
TUBB3-205ENST00000554336 GLB1L3Q8NCI6 653 aaPredicted RBP16■□□□□ 0.15
TUBB3-205ENST00000554336 OR1N1Q8NGS0 311 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms