RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RPL38P63173 70 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SP140Q13342 867 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 MAD2L1BPQ15013 274 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CTU2Q2VPK5 515 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 GPR33Q49SQ1 333 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 PAGE2BQ5JRK9 111 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SPANXN2Q5MJ10 180 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ZDHHC20Q5W0Z9 365 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 FAHD1Q6P587 224 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 XKRXQ6PP77 449 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TBPL2Q6SJ96 375 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 EIF3MQ7L2H7 374 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF367Q7RTV3 350 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 LRRC70Q7Z2Q7 622 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TRMT11Q7Z4G4 463 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SCD5Q86SK9 330 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 MMAAQ8IVH4 418 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ARL14EPQ8N8R7 260 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TTC29Q8NA56 475 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 PLA2G15Q8NCC3 412 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF540Q8NDQ6 660 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 VPS37AQ8NEZ2 397 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 OR2T11Q8NH01 316 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 OR10A6Q8NH74 314 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 FBXO30Q8TB52 745 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 HMGB4Q8WW32 186 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ULK4Q96C45 1275 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 RHBDF1Q96CC6 855 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CXorf40BQ96DE9 158 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CMTM7Q96FZ5 175 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 LRIG1Q96JA1 1093 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 RPL10LQ96L21 214 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 RPRD1AQ96P16 312 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 COL21A1Q96P44 957 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 BBC3Q96PG8 261 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 OR52E6Q96RD3 313 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SIGLEC11Q96RL6 698 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CLPBQ9H078 707 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 P2RY12Q9H244 342 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 DCSTAMPQ9H295 470 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ACTL8Q9H568 366 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 C3orf14Q9HBI5 128 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 DYRK4Q9NR20 520 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 KRT84Q9NSB2 600 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ADPRHL2Q9NX46 363 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 CNOT2Q9NZN8 540 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 MPP6Q9NZW5 540 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 VAPAQ9P0L0 249 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 SPATA7Q9P0W8 599 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 GALPQ9UBC7 116 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 HECAQ9UBI9 543 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 EIF2B4Q9UI10 523 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 STUB1Q9UNE7 303 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ZFR2Q9UPR6 939 aaKnown RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TRAPPC4Q9Y296 219 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 POFUT2Q9Y2G5 429 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 POLR3HQ9Y535 204 aaPredicted RBP5.63□□□□□ -1.51
VPS33B-203ENST00000554264 TIMM22Q9Y584 194 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 PCDHGB3Q9Y5G1 929 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 ARL5AQ9Y689 179 aa5.63□□□□□ -1.51
VPS33B-203ENST00000554264 THADAQ6YHU6 1953 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 ASCC3Q8N3C0 2202 aaKnown RBP5.62□□□□□ -1.51
VPS33B-203ENST00000554264 EFCAB10A6NFE3 127 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 METTL15A6NJ78 407 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 PTGES3LE9PB15 166 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 E9PQ18 207 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 CACNB4O00305 520 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-203ENST00000554264 OR7A17O14581 309 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 SLC9A3R1O14745 358 aaPredicted RBP5.62□□□□□ -1.51
VPS33B-203ENST00000554264 KPNA5O15131 536 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 SLC16A5O15375 505 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 SH3BP5O60239 455 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 ZNF217O75362 1048 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GJB3O75712 270 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 KAT7O95251 611 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 CLDN9O95484 217 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 KRT75O95678 551 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 LY86O95711 162 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 SERPINA1P01009 418 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 IFNA14P01570 189 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 SEMG1P04279 462 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 C8GP07360 202 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 ANXA5P08758 320 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GSTT2P0CG29 244 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GSTT2BP0CG30 244 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GAAP10253 952 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GNSP15586 552 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 DDX5P17844 614 aaKnown RBP5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GPX2P18283 190 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 ITGALP20701 1170 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 TACR2P21452 398 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 HMGCLP35914 325 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GGT5P36269 586 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 TNFRSF4P43489 277 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 ASMTP46597 345 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GPR15P49685 360 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 GZMMP51124 257 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 LGALS4P56470 323 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 SCAND1P57086 179 aa5.62□□□□□ -1.51
VPS33B-203ENST00000554264 MAXP61244 160 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms