RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.16□□□□□ -1.26
TDP1-209ENST00000554180 FHL5Q5TD97 284 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
TDP1-209ENST00000554180 ZCCHC12Q6PEW1 402 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 TMEM107Q6UX40 140 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 ANGPTL8Q6UXH0 198 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 C6orf120Q7Z4R8 191 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 DHFR2Q86XF0 187 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 PROSER1Q86XN7 944 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 AQP12AQ8IXF9 295 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 MICU2Q8IYU8 434 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 LGI4Q8N135 537 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 VWA5B2Q8N398 1253 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 GALNT15Q8N3T1 639 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 METTL25Q8N6Q8 603 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 C11orf65Q8NCR3 313 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 PLPP5Q8NEB5 264 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 OR7G2Q8NG99 324 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 OR52E4Q8NGH9 312 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 OR5AK3PQ8NH89 298 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 STT3BQ8TCJ2 826 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 WDR60Q8WVS4 1066 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.16□□□□□ -1.26
TDP1-209ENST00000554180 RIT1Q92963 219 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 SLC35G5Q96KT7 338 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 ART5Q96L15 291 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 PTCHD1Q96NR3 888 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 DGAT2Q96PD7 388 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 PHOX2BQ99453 314 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 YIPF2Q9BWQ6 316 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 TRIM8Q9BZR9 551 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 VN1R1Q9GZP7 353 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 ADAP2Q9NPF8 381 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 GPATCH2Q9NW75 528 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 MAT2BQ9NZL9 334 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 IFT80Q9P2H3 777 aaPredicted RBP7.16□□□□□ -1.26
TDP1-209ENST00000554180 PISDQ9UG56 409 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 ACSL6Q9UKU0 697 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 MKL2Q9ULH7 1088 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 B3GALT1Q9Y5Z6 326 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 SCN3AQ9NY46 2000 aa7.16□□□□□ -1.26
TDP1-209ENST00000554180 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SPAARA0A1B0GVQ0 90 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 TMEM247A6NEH6 219 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 DUXAA6NLW8 204 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ARPC2O15144 300 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 MGRN1O60291 552 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GFRA3O60609 400 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PRAMEF2O60811 474 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 JRKO75564 520 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 STK17BO94768 372 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SORBS2O94875 1100 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 RECKO95980 971 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 HMGN2P05204 90 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 ZNF28P17035 718 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GGT1P19440 569 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SDHBP21912 280 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 CD82P27701 267 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SOX18P35713 384 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ETV5P41161 510 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PRIM2P49643 509 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 POLE2P56282 527 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 OR4D2P58180 307 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 DSTNP60981 165 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 MRPS35P82673 323 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 MS4A2Q01362 244 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 FUT7Q11130 342 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ELOAQ14241 798 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 ERV3-1Q14264 604 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 GNA13Q14344 377 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 KPNB1Q14974 876 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 NCF4Q15080 339 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 LTB4RQ15722 352 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 NSDHLQ15738 373 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ADRM1Q16186 407 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 NKG7Q16617 165 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 VWA2Q5GFL6 755 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 COX20Q5RI15 118 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 EXOSC6Q5RKV6 272 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 GCNT6Q5T4J0 391 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 INTS11Q5TA45 600 aaKnown RBP7.15□□□□□ -1.26
TDP1-209ENST00000554180 MFSD4BQ5TF39 518 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PRAMEF8Q5VWM4 474 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PRAMEF7Q5VXH5 474 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 MFSD12Q6NUT3 480 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ZFP1Q6P2D0 407 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 IGF2-ASQ6U949 168 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 FAM198BQ6UWH4 519 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SZRD1Q7Z422 152 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 IFNEQ86WN2 208 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 PTOV1Q86YD1 416 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ZZZ3Q8IYH5 903 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 SHISA5Q8N114 240 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 CLEC4FQ8N1N0 589 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 C10orf111Q8N326 155 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ESX1Q8N693 406 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 FAM156AQ8NDB6 213 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 NUP43Q8NFH3 380 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 ADCY4Q8NFM4 1077 aa7.15□□□□□ -1.26
TDP1-209ENST00000554180 OR7G1Q8NGA0 311 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms