RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SEMA4CQ9C0C4 833 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ING2Q9H160 280 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ARMCX1Q9P291 453 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 COPS7AQ9UBW8 275 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ZNF639Q9UID6 485 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 BTNL2Q9UIR0 455 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 ZNF223Q9UK11 482 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-209ENST00000553949 KCNMB2Q9Y691 235 aa11.4□□□□□ -0.58
SHMT2-209ENST00000553949 CCDC88CQ9P219 2028 aa11.4□□□□□ -0.59
SHMT2-209ENST00000553949 A0A087WV62 115 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 TRBV11-1A0A0K0K1C0 115 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CCDC154A6NI56 674 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 PLOD2O00469 737 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 SLC22A2O15244 555 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CFLARO15519 480 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 PLOD3O60568 738 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CBX7O95931 251 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 ABCB1P08183 1280 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-209ENST00000553949 IFI6P09912 130 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CAPN3P20807 821 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 S1PR1P21453 382 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 SSTR4P31391 388 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CLCN2P51788 898 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 AP2B1P63010 937 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 HBA1P69905 142 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 LRRC74AQ0VAA2 488 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 VPS26BQ4G0F5 336 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 FHL5Q5TD97 284 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 GK5Q6ZS86 529 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 MSANTD1Q6ZTZ1 278 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 APLFQ8IW19 511 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-209ENST00000553949 KIF2BQ8N4N8 673 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 OR52R1Q8NGF1 315 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 OR4A15Q8NGL6 344 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 PSMA8Q8TAA3 256 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 ELP5Q8TE02 316 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 MYLK2Q9H1R3 596 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 OR10A5Q9H207 317 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 RMND5AQ9H871 391 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 ANKRA2Q9H9E1 313 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 NEUROD4Q9HD90 331 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 SLC52A3Q9NQ40 469 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 SIRT3Q9NTG7 399 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-209ENST00000553949 TAS2R9Q9NYW1 312 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 PTGFRNQ9P2B2 879 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 BCAP29Q9UHQ4 241 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 PCDHGB4Q9UN71 923 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 SNX8Q9Y5X2 465 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 CAPN7Q9Y6W3 813 aa11.39□□□□□ -0.59
SHMT2-209ENST00000553949 SCN2AQ99250 2005 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 A0A1W2PP18 115 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 DYTNA2CJ06 578 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 ASPDHA6ND91 283 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 UPK1AO00322 258 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 PRAMEF2O60811 474 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 DCTN3O75935 186 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 CPSF4O95639 269 aaKnown RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SNRPB2P08579 225 aaKnown RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 ITGAMP11215 1152 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 ITGA3P26006 1051 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SLC37A1P57057 533 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SOX8P57073 446 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 DUSP8Q13202 625 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 EXOSC7Q15024 291 aaKnown RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 TLR1Q15399 786 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 MAPKAPK3Q16644 382 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 JMJD6Q6NYC1 403 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 BORAQ6PGQ7 559 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SLC2A7Q6PXP3 512 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 HSDL2Q6YN16 418 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 RNF111Q6ZNA4 994 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 GALNT16Q8N428 558 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 ZNF615Q8N8J6 731 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SIMC1Q8NDZ2 872 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 TSPEARQ8WU66 669 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 APOBEC4Q8WW27 367 aaKnown RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 CRELD1Q96HD1 420 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 THOC3Q96J01 351 aaKnown RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 ITCHQ96J02 903 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 MAGED4Q96JG8 741 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 PANX1Q96RD7 426 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 INPP5KQ9BT40 448 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 CCDC106Q9BWC9 280 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 TRIM4Q9C037 500 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 LHPPQ9H008 270 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 PRORYQ9H606 182 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 CXorf36Q9H7Y0 433 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SERHLQ9NQF3 203 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 DDX18Q9NVP1 670 aaKnown RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.38□□□□□ -0.596e-6■■□□□ 12.1
SHMT2-209ENST00000553949 C19orf53Q9UNZ5 99 aaPredicted RBP11.38□□□□□ -0.59
SHMT2-209ENST00000553949 ERVK-11Q9UQG0 969 aa11.38□□□□□ -0.59
SHMT2-209ENST00000553949 LOC400499M0QZD8 3231 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 A6NL46 340 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 OR6C76A6NM76 312 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 A8MUI8 341 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 RFXANKO14593 260 aa11.37□□□□□ -0.59
SHMT2-209ENST00000553949 ANGPT2O15123 496 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms