RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 ANKRD46Q86W74 232 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 OR2L13Q8N349 312 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 VWA5B2Q8N398 1253 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 OR1N1Q8NGS0 311 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 ELP5Q8TE02 316 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 DOK4Q8TEW6 326 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 ELP4Q96EB1 424 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 SENP5Q96HI0 755 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-208ENST00000553719 VPS50Q96JG6 964 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 CXorf36Q9H7Y0 433 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 ZNF160Q9HCG1 818 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 WDR70Q9NW82 654 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 TAS2R9Q9NYW1 312 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 ERVK-19Q9WJR5 959 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 MGAQ8IWI9 3026 aa16.8■□□□□ 0.28
PSEN1-208ENST00000553719 NUP214P35658 2090 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-208ENST00000553719 CCDC154A6NI56 674 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 MASP2O00187 686 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 PEX12O00623 359 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 FBP2O00757 339 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 SNRPB2P08579 225 aaKnown RBP16.79■□□□□ 0.28
PSEN1-208ENST00000553719 PRKAR1AP10644 381 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 SSTR4P31391 388 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 CDKN2CP42773 168 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 UCNP55089 124 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 CBX1P83916 185 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 ZNF267Q14586 743 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-208ENST00000553719 EXT1Q16394 746 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 TRMT12Q53H54 448 aaKnown RBP16.79■□□□□ 0.28
PSEN1-208ENST00000553719 COQ5Q5HYK3 327 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 PAGE3Q5JUK9 113 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 TMEM107Q6UX40 140 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 TMEM64Q6YI46 380 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 DPP10Q8N608 796 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 FITM2Q8N6M3 262 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 ZNF615Q8N8J6 731 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 M1APQ8TC57 530 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 KAT2AQ92830 837 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 NCLNQ969V3 563 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 LRRC37BQ96QE4 947 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 INPP5KQ9BT40 448 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 MMP25Q9NPA2 562 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 PTGFRNQ9P2B2 879 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 C19orf53Q9UNZ5 99 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-208ENST00000553719 POLHQ9Y253 713 aa16.79■□□□□ 0.28
PSEN1-208ENST00000553719 MAP1BP46821 2468 aaKnown RBP16.79■□□□□ 0.28
PSEN1-208ENST00000553719 MED13Q9UHV7 2174 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 UPK1AO00322 258 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 CELA2AP08217 269 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 TNNI3P19429 210 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 PGDP52209 483 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 SLC37A1P57057 533 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 TMPRSS3P57727 454 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 GAB1Q13480 694 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 MAPKAPK3Q16644 382 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 LRIF1Q5T3J3 769 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 BROXQ5VW32 411 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 SLC2A7Q6PXP3 512 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 SNX32Q86XE0 403 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 TMEM102Q8N9M5 508 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-208ENST00000553719 VPS37AQ8NEZ2 397 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 OR7G1Q8NGA0 311 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 FAM120BQ96EK7 910 aaKnown RBP16.78■□□□□ 0.28
PSEN1-208ENST00000553719 VMP1Q96GC9 406 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 ART5Q96L15 291 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 SLC25A23Q9BV35 468 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 CNPPD1Q9BV87 410 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 NUDT9Q9BW91 350 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 OR8D2Q9GZM6 311 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 ANKRA2Q9H9E1 313 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 CPNE5Q9HCH3 593 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 SLC6A13Q9NSD5 602 aa16.78■□□□□ 0.28
PSEN1-208ENST00000553719 DSPP15924 2871 aaKnown RBP16.78■□□□□ 0.28
PSEN1-208ENST00000553719 PKD1L2Q7Z442 2459 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 USP24Q9UPU5 2620 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 DOCK10Q96BY6 2186 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 TRBV5-3A0A0A0MS03 114 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 SERPINA7P05543 415 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 PRDX6P30041 224 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 SOX8P57073 446 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 EXOSC7Q15024 291 aaKnown RBP16.77■□□□□ 0.28
PSEN1-208ENST00000553719 MAPRE2Q15555 327 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 EXOSC6Q5RKV6 272 aaKnown RBP16.77■□□□□ 0.28
PSEN1-208ENST00000553719 MSRB3Q8IXL7 192 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 C9orf40Q8IXQ3 194 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 ARMC10Q8N2F6 343 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 KIF2BQ8N4N8 673 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 ZSCAN1Q8NBB4 408 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 OR4A15Q8NGL6 344 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 RP9Q8TA86 221 aaKnown RBP16.77■□□□□ 0.28
PSEN1-208ENST00000553719 SFXN5Q8TD22 340 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 GIMAP5Q96F15 307 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 ITCHQ96J02 903 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 FER1L6-AS2Q96M78 137 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 PAIP1Q9H074 479 aaKnown RBP16.77■□□□□ 0.28
PSEN1-208ENST00000553719 EPS8L2Q9H6S3 715 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 RMND5AQ9H871 391 aa16.77■□□□□ 0.28
PSEN1-208ENST00000553719 NDUFAF1Q9Y375 327 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms