RNA–Protein interactions for RNA: ENST00000553673.1

FCF1-204, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-204ENST00000553673 NDE1Q9NXR1 346 aa3.54□□□□□ -1.84
FCF1-204ENST00000553673 VPS18Q9P253 973 aa3.54□□□□□ -1.84
FCF1-204ENST00000553673 ASIC3Q9UHC3 531 aa3.54□□□□□ -1.84
FCF1-204ENST00000553673 PIN4Q9Y237 131 aaKnown RBP3.54□□□□□ -1.84
FCF1-204ENST00000553673 ATP6V1DQ9Y5K8 247 aa3.54□□□□□ -1.84
FCF1-204ENST00000553673 COLEC10Q9Y6Z7 277 aa3.54□□□□□ -1.84
FCF1-204ENST00000553673 KIAA0100Q14667 2235 aaKnown RBP3.54□□□□□ -1.84
FCF1-204ENST00000553673 LRRC37A2A6NM11 1700 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 A0A1W2PRQ8 180 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 MTMR11A4FU01 709 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CCDC169A6NNP5 214 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 A8MVM7 634 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 PRSS46E5RG02 174 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 B4GALT5O43286 388 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CA3P07451 260 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 LBPP18428 481 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 AXLP30530 894 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 DUTP33316 252 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 PEX3P56589 373 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 ROR1Q01973 937 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 NCBP1Q09161 790 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 GIT2Q14161 759 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 PPA1Q15181 289 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 MAPK6Q16659 721 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 MOGAT2Q3SYC2 334 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 HECTD3Q5T447 861 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 FAM46CQ5VWP2 391 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 RESP18Q5W5W9 173 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 TWF2Q6IBS0 349 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 OR4C11Q6IEV9 310 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 Q7L0L9 218 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 PIGWQ7Z7B1 504 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 MEX3DQ86XN8 651 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 ECHDC2Q86YB7 292 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 ZNF440Q8IYI8 595 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CCDC185Q8N715 623 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 NKAIN3Q8N8D7 197 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 GTF3AQ92664 365 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 CORO2AQ92828 525 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CASP10Q92851 521 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 NXPE2Q96DL1 559 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CCDC51Q96ER9 411 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CPB2Q96IY4 423 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 RBM41Q96IZ5 413 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 TSSK2Q96PF2 358 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 RBM4BQ9BQ04 359 aaKnown RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 ALKBH7Q9BT30 221 aaPredicted RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 PI4K2AQ9BTU6 479 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 MLPHQ9BV36 600 aaPredicted RBP3.53□□□□□ -1.84
FCF1-204ENST00000553673 NFKBIZQ9BYH8 718 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 C2orf40Q9H1Z8 148 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 AGPAT5Q9NUQ2 364 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 TMEM161AQ9NX61 479 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CHMP5Q9NZZ3 219 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 CDH7Q9ULB5 785 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 ODF2LQ9ULJ1 636 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 KLK4Q9Y5K2 254 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 ARID2Q68CP9 1835 aa3.53□□□□□ -1.84
FCF1-204ENST00000553673 MYH4Q9Y623 1939 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ADGRA3Q8IWK6 1321 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 A0A087WZ39 114 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 A0A0B4J203 849 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ILVBLA1L0T0 632 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 OOEPA6NGQ2 149 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 K7ERI5 159 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 SLC16A4O15374 487 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 POLR2DO15514 142 aaKnown RBP3.52□□□□□ -1.85
FCF1-204ENST00000553673 SELENOFO60613 162 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 SAP30O75446 220 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ZSCAN5DPP0CG00 497 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 SP9P0CG40 484 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 KRT3P12035 628 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 KRT5P13647 590 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ARF4P18085 180 aaPredicted RBP3.52□□□□□ -1.85
FCF1-204ENST00000553673 CMA1P23946 247 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 SYKP43405 635 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 NPBWR1P48145 328 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ZNF131P52739 623 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 CETN1Q12798 172 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 BTG3Q14201 252 aaPredicted RBP3.52□□□□□ -1.85
FCF1-204ENST00000553673 MTF1Q14872 753 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 DUSP5Q16690 384 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 FAM106AQ4KMX7 169 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 TAF1BQ53T94 588 aaPredicted RBP3.52□□□□□ -1.85
FCF1-204ENST00000553673 C2CD6Q53TS8 623 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 MPP7Q5T2T1 576 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 C11orf88Q6PI97 169 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ANKRD46Q86W74 232 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 CDR2LQ86X02 465 aaPredicted RBP3.52□□□□□ -1.85
FCF1-204ENST00000553673 CATSPERDQ86XM0 798 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 CCDC65Q8IXS2 484 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 METTL4Q8N3J2 472 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 DEFB123Q8N688 67 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 TMEM161BQ8NDZ6 487 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 ARNTL2Q8WYA1 636 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 MR1Q95460 341 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 C18orf12Q96KH6 178 aa3.52□□□□□ -1.85
FCF1-204ENST00000553673 AGAP4Q96P64 663 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms