RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NDUFAF4Q9P032 175 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 PTGFRNQ9P2B2 879 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 EPHA6Q9UF33 1036 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 POMT2Q9UKY4 750 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 PNMA8BQ9ULN7 279 aaPredicted RBP6.89□□□□□ -1.31
ATXN3-221ENST00000553498 CA14Q9ULX7 337 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 DAPP1Q9UN19 280 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ATG4BQ9Y4P1 393 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ENPP4Q9Y6X5 453 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 ATG2AQ2TAZ0 1938 aa6.89□□□□□ -1.31
ATXN3-221ENST00000553498 A0A087WV62 115 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 PRAMEF33A0A0G2JMD5 474 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ANKRD33BA6NCL7 494 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 SYNDIG1LA6NDD5 238 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 LMO7DNF2Z398 122 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 TNFRSF11BO00300 401 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 SYT5O00445 386 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 HMGN4O00479 90 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 EREGO14944 169 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 UBXN7O94888 489 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 MFN2O95140 757 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 PGM3O95394 542 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 OXSR1O95747 527 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 AK1P00568 194 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 GUSBP08236 651 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CCDC159P0C7I6 412 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 FOSL2P15408 326 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 EFNA1P20827 205 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 MATN1P21941 496 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CPN2P22792 545 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CERS1P27544 350 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 XCR1P46094 333 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ALDH3B2P48448 385 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CDK9P50750 372 aaKnown RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CRYBA2P53672 197 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 TPD52P55327 224 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 NUP107P57740 925 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 RAB8AP61006 207 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 TCEA2Q15560 299 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 NDUFA9Q16795 377 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 RSPO4Q2I0M5 234 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 PRSS53Q2L4Q9 553 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 WDR45BQ5MNZ6 344 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 XP32Q5T750 250 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ATAD3BQ5T9A4 648 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 GARNL3Q5VVW2 1013 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 OGFOD3Q6PK18 319 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 IGF2-ASQ6U949 168 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 VTCN1Q7Z7D3 282 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 LRRC25Q8N386 305 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 PARP8Q8N3A8 854 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 HORMAD2Q8N7B1 307 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 OR10G6Q8NH81 332 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 OR5AK3PQ8NH89 298 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 SUN3Q8TAQ9 357 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 GIPC3Q8TF64 312 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 FBLIM1Q8WUP2 373 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 DNASE2BQ8WZ79 361 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 MAL2Q969L2 176 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 PMEPA1Q969W9 287 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ELP4Q96EB1 424 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 TMEM19Q96HH6 336 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 MAGED4Q96JG8 741 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF354BQ96LW1 612 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF681Q96N22 645 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 SLC6A18Q96N87 628 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 MUS81Q96NY9 551 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 TRNT1Q96Q11 434 aaKnown RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 NRTNQ99748 197 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 LRRC61Q9BV99 259 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 SSBP4Q9BWG4 385 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 GABARAPL3Q9BY60 117 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 AICDAQ9GZX7 198 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF556Q9HAH1 456 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CACYBPQ9HB71 228 aaKnown RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 GIN1Q9NXP7 522 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 PDP1Q9P0J1 537 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 KCMF1Q9P0J7 381 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 KIF17Q9P2E2 1029 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 TMEFF2Q9UIK5 374 aaPredicted RBP6.88□□□□□ -1.31
ATXN3-221ENST00000553498 KCND3Q9UK17 655 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ACSL6Q9UKU0 697 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 ABCG2Q9UNQ0 655 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 POFUT2Q9Y2G5 429 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 CSNK1G3Q9Y6M4 447 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 COMMD3-BMI1R4GMX3 469 aa6.88□□□□□ -1.31
ATXN3-221ENST00000553498 RANBP2P49792 3224 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 TTC36A6NLP5 189 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 H0YGG7 62 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 hCG_2039718K7EN88 272 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 BCKDKO14874 412 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 SLC28A2O43868 658 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 GALR3O60755 368 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CTSVO60911 334 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ERAL1O75616 437 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ATP1B1P05026 303 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 BCHEP06276 602 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 GNAO1P09471 354 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms