RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 WDFY4Q6ZS81 3184 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 HMGN4O00479 90 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 POLR1CO15160 346 aaPredicted RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 GDF9O60383 454 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 FOXD2O60548 495 aaPredicted RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 PLOD3O60568 738 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 BMP10O95393 424 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 SERPINA1P01009 418 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 MAOAP21397 527 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 KDELR2P33947 212 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 STT3AP46977 705 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 ANXA11P50995 505 aaKnown RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 TXNL4AP83876 142 aaKnown RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 CDK6Q00534 326 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 INSM1Q01101 510 aaPredicted RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 BIKQ13323 160 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 SCARB2Q14108 478 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 SERTAD2Q14140 314 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 LASP1Q14847 261 aaKnown RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 COX15Q7KZN9 410 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 PIP4P1Q86T03 277 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 SLC30A8Q8IWU4 369 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 SLC38A9Q8NBW4 561 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 RNF31Q96EP0 1072 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 GIMAP5Q96F15 307 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 DGAT2Q96PD7 388 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 CTRCQ99895 268 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 EFHD1Q9BUP0 239 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 MKKSQ9NPJ1 570 aaPredicted RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 NECTIN3Q9NQS3 549 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 FBXO8Q9NRD0 319 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 ARMC1Q9NVT9 282 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 C19orf53Q9UNZ5 99 aaPredicted RBP16.46■□□□□ 0.23
PSEN1-206ENST00000553447 AURKCQ9UQB9 309 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 ANGPT4Q9Y264 503 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 KIF26BQ2KJY2 2108 aa16.46■□□□□ 0.23
PSEN1-206ENST00000553447 OR2W5A6NFC9 320 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 B4E171 279 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 TMX2-CTNND1H3BSU7 103 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 CT62P0C5K7 136 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 OR12D1P0DN82 309 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 CCL4P13236 92 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 TSPAN7P41732 249 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 MAPK10P53779 464 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 SESN3P58005 492 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 MAP4K2Q12851 820 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 LRRC23Q53EV4 343 aaPredicted RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 TRMT12Q53H54 448 aaKnown RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 TBCELQ5QJ74 424 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 INTS11Q5TA45 600 aaKnown RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 STPG1Q5TH74 334 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 CDCP2Q5VXM1 449 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 DGAT2L6Q6ZPD8 337 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 QSOX2Q6ZRP7 698 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 LGI4Q8N135 537 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 EID3Q8N140 333 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 PQLC1Q8N2U9 271 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 PAPD5Q8NDF8 572 aaKnown RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 OR5D16Q8NGK9 328 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 FBXO30Q8TB52 745 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 FAM110BQ8TC76 370 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 DOK4Q8TEW6 326 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 RAB8BQ92930 207 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 POP5Q969H6 163 aaKnown RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 CTHRC1Q96CG8 243 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 C16orf58Q96GQ5 468 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 PELOQ9BRX2 385 aaKnown RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 YIPF4Q9BSR8 244 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 ACTRT3Q9BYD9 372 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 STRADBQ9C0K7 418 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 CXorf21Q9HAI6 301 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 SLC22A11Q9NSA0 550 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 AKAP7Q9P0M2 348 aaPredicted RBP16.45■□□□□ 0.22
PSEN1-206ENST00000553447 STOML1Q9UBI4 398 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 PCDHGA1Q9Y5H4 931 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 V9GYQ6 96 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 DMDP11532 3685 aa16.45■□□□□ 0.22
PSEN1-206ENST00000553447 VPS13AQ96RL7 3174 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 ONECUT2O95948 504 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 TFPTP0C1Z6 253 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 RHAGQ02094 409 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 MYBPC3Q14896 1274 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 MINDY4Q4G0A6 757 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 NKAIN1Q4KMZ8 207 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 VWA2Q5GFL6 755 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 MFSD4BQ5TF39 518 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 ZNF385CQ66K41 422 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-206ENST00000553447 MFSD12Q6NUT3 480 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 ENPP6Q6UWR7 440 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 CCDC80Q76M96 950 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 GALNT10Q86SR1 603 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 PACS2Q86VP3 889 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 GALNT12Q8IXK2 581 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 VWA5B2Q8N398 1253 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 SIMC1Q8NDZ2 872 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 SLC38A5Q8WUX1 472 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 RIT1Q92963 219 aa16.44■□□□□ 0.22
PSEN1-206ENST00000553447 RBM18Q96H35 190 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms