RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 PCDH17O14917 1159 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 PDPK1O15530 556 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 PROM1O43490 865 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 LDB3O75112 727 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 PRKRAO75569 313 aaKnown RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ONECUT2O95948 504 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 G6PDP11413 515 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 COX6B1P14854 86 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 DDCP20711 480 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 PRPS1L1P21108 318 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 MAOAP21397 527 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 GPC1P35052 558 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 DIO3P55073 304 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ID2Q02363 134 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 EEF1A2Q05639 463 aaKnown RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 PTGR1Q14914 329 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ZNF630Q2M218 657 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 PGS1Q32NB8 556 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 KRTAP21-3Q3LHN1 58 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 IRAK1BP1Q5VVH5 260 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 MRM1Q6IN84 353 aaKnown RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 LARP4Q71RC2 724 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 MRGPRGQ86SM5 289 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ZNF295-AS1Q8N0V1 137 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 OR1N1Q8NGS0 311 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ZFP28Q8NHY6 868 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 TM4SF18Q96CE8 201 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 RBM18Q96H35 190 aaKnown RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 THOC3Q96J01 351 aaKnown RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 MAELQ96JY0 434 aaKnown RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ZNF317Q96PQ6 595 aaPredicted RBP10.62□□□□□ -0.71
TMEM116-218ENST00000552839 TAAR6Q96RI8 345 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 SPSB2Q99619 263 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 VN1R1Q9GZP7 353 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 REEP4Q9H6H4 257 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 CHST11Q9NPF2 352 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 AIG1Q9NVV5 245 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ASIC5Q9NY37 505 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 FAM53CQ9NYF3 392 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 BAIAP2L1Q9UHR4 511 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ASB4Q9Y574 426 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 HS3ST3B1Q9Y662 390 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 AKAP9Q99996 3911 aa10.62□□□□□ -0.71
TMEM116-218ENST00000552839 ZFHX3Q15911 3703 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 VSTM2BA6NLU5 285 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 SCAMP2O15127 329 aaKnown RBP10.61□□□□□ -0.71
TMEM116-218ENST00000552839 CTNSO60931 367 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 DNAJB6O75190 326 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 PRR35P0CG20 571 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 NT5EP21589 574 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 TACR1P25103 407 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 IRX1P78414 480 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-218ENST00000552839 FOLH1Q04609 750 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 BIKQ13323 160 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 MFAP5Q13361 173 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 SQLEQ14534 574 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 KIAA0040Q15053 153 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 TESK1Q15569 626 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 DPY19L1Q2PZI1 675 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 CPTPQ5TA50 214 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 GKAP1Q5VSY0 366 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-218ENST00000552839 TMEM198Q66K66 360 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 SLC48A1Q6P1K1 146 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 ISLR2Q6UXK2 745 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 LINC00696Q6ZRV3 163 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 SZRD1Q7Z422 152 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 OR4N5Q8IXE1 308 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 LRRC25Q8N386 305 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-218ENST00000552839 ZNF808Q8N4W9 903 aaPredicted RBP10.61□□□□□ -0.71
TMEM116-218ENST00000552839 ANKS4BQ8N8V4 417 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 VPS37AQ8NEZ2 397 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 NR4A3Q92570 626 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 TSLPQ969D9 159 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 MTERF3Q96E29 417 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 FCRL1Q96LA6 429 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 LMF1Q96S06 567 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 LPAR4Q99677 370 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 LANCL2Q9NS86 450 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 EHD3Q9NZN3 535 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 KCMF1Q9P0J7 381 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 CLCA3PQ9Y6N3 262 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 CPAMD8Q8IZJ3 1885 aa10.61□□□□□ -0.71
TMEM116-218ENST00000552839 SCN2AQ99250 2005 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 CACNA1CQ13936 2221 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 NSG1A0A0A6YYJ2 146 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 TRGV8A0A0C4DH27 118 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 MYOCOSA0A1B0GUC4 107 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 A8MUA0 341 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 CCL21O00585 134 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 CYR61O00622 381 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 ZNF195O14628 629 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 CFLARO15519 480 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 FGF17O60258 216 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 CCDC22O60826 627 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 SLC22A3O75751 556 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 GPR75O95800 540 aa10.6□□□□□ -0.71
TMEM116-218ENST00000552839 ALDOCP09972 364 aaKnown RBP10.6□□□□□ -0.71
TMEM116-218ENST00000552839 CSNK2A2P19784 350 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-218ENST00000552839 DRD4P21917 467 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms