RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 PLEKHM3Q6ZWE6 761 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 DENND6AQ8IWF6 608 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 C9orf40Q8IXQ3 194 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 DND1Q8IYX4 353 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 FAM47BQ8NA70 645 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 MAPK1IP1LQ8NDC0 245 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 OR10G3Q8NGC4 313 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 FBXL8Q96CD0 374 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 MS4A6EQ96DS6 147 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 PIK3IP1Q96FE7 263 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 PIGQQ9BRB3 760 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 NAT9Q9BTE0 207 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 PIGMQ9H3S5 423 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 FBXO6Q9NRD1 293 aaPredicted RBP10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 IARS2Q9NSE4 1012 aaKnown RBP10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 C20orf96Q9NUD7 363 aaPredicted RBP10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 FETUBQ9UGM5 382 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 ALPK2Q86TB3 2170 aa10.36□□□□□ -0.75
SUPT16H-202ENST00000552829 ZCWPW2A0A1B0GU75 182 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 C17orf105B2RV13 164 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 RNF223E7ERA6 249 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 TMCC2O75069 709 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 LRATO95237 230 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 CPN1P15169 458 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 CREB1P16220 341 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 KRT15P19012 456 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 CPA2P48052 419 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 NAGLUP54802 743 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 LIM2P55344 173 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 STXBP1P61764 594 aaKnown RBP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 LSM11P83369 360 aaKnown RBP eCLIP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 FAM27E3Q08E93 113 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 NTRK2Q16620 822 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 ADPRMQ3LIE5 342 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 NXPE4Q6UWF7 544 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 TDRPQ86YL5 185 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 ZNF441Q8N8Z8 693 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 GPATCH11Q8N954 259 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 SLC22A8Q8TCC7 542 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 ABTB1Q969K4 478 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 ANKRD9Q96BM1 317 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 PGM2Q96G03 612 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 SENP5Q96HI0 755 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 ZNF597Q96LX8 424 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 JSRP1Q96MG2 331 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 AIF1LQ9BQI0 150 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 DOHHQ9BU89 302 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 STMN4Q9H169 189 aaPredicted RBP10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 CCDC68Q9H2F9 335 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 DAPP1Q9UN19 280 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 WIF1Q9Y5W5 379 aa10.35□□□□□ -0.75
SUPT16H-202ENST00000552829 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 A0A1W2PPM1 405 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TRIM49D1C9J1S8 452 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 MSTNO14793 375 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 ERI3O43414 337 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 B3GALT2O43825 422 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 SPAG7O75391 227 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TRAPPC6AO75865 159 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TNFSF13O75888 250 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 FAM157CP0CG43 387 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 CCKARP32238 428 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 NR1H2P55055 460 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 AP1S2P56377 157 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 EEF1A1P68104 462 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 IGLV3-21P80748 117 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 SERTAD2Q14140 314 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 RCAN2Q14206 197 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 RBBP5Q15291 538 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 CHRFAM7AQ494W8 412 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 EIPR1Q53HC9 387 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 HSP90AA5PQ58FG0 334 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 EEF1A1P5Q5VTE0 462 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 EXOC3L1Q86VI1 746 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 KLHDC8AQ8IYD2 350 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 C4orf33Q8N1A6 199 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 FAM13CQ8NE31 585 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 GABPB2Q8TAK5 448 aaPredicted RBP10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 CDKL2Q92772 493 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 WNT2BQ93097 391 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 INTS12Q96CB8 462 aaKnown RBP10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 FAR2Q96K12 515 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TSNARE1Q96NA8 513 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TM9SF2Q99805 663 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 TUBA1CQ9BQE3 449 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 G6PC3Q9BUM1 346 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 REG4Q9BYZ8 158 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 KLHL28Q9NXS3 571 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 ZNF226Q9NYT6 803 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 MOCS1Q9NZB8 636 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 C15orf41Q9Y2V0 281 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 PSAT1Q9Y617 370 aa10.34□□□□□ -0.75
SUPT16H-202ENST00000552829 IQANK1A0A1B0GTG1 560 aa10.33□□□□□ -0.76
SUPT16H-202ENST00000552829 MAGEB16A2A368 324 aa10.33□□□□□ -0.76
SUPT16H-202ENST00000552829 LRRC14BA6NHZ5 514 aa10.33□□□□□ -0.76
SUPT16H-202ENST00000552829 GOLGA8RI6L899 631 aa10.33□□□□□ -0.76
SUPT16H-202ENST00000552829 HRKO00198 91 aa10.33□□□□□ -0.76
SUPT16H-202ENST00000552829 LDB3O75112 727 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms