RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-223ENST00000551551 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 SMC6Q96SB8 1091 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 PRPF18Q99633 342 aaKnown RBP8.36□□□□□ -1.07
ATXN2-223ENST00000551551 CNPPD1Q9BV87 410 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 ZNF717Q9BY31 904 aaPredicted RBP8.36□□□□□ -1.07
ATXN2-223ENST00000551551 LDAHQ9H6V9 325 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 ZDHHC11Q9H8X9 412 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 C3orf14Q9HBI5 128 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 ZFP64Q9NPA5 681 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 SDHAF3Q9NRP4 125 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 MKS1Q9NXB0 559 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 TBK1Q9UHD2 729 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 MEMO1Q9Y316 297 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 NPFFR2Q9Y5X5 522 aa8.36□□□□□ -1.07
ATXN2-223ENST00000551551 ASH1LQ9NR48 2969 aaKnown RBP8.36□□□□□ -1.07
ATXN2-223ENST00000551551 PCSK5Q92824 1860 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 A0A087WV62 115 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 TMEM200CA6NKL6 621 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 AHRRA9YTQ3 701 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 TMEM114B3SHH9 223 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 AQP7O14520 342 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 TMPRSS11DO60235 418 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ZNF500O60304 480 aaPredicted RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 PLOD3O60568 738 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 COQ9O75208 318 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 EEDO75530 441 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 OR4F21O95013 312 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 HSPA4LO95757 839 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 IGHG3P01860 377 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 NT5EP21589 574 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 PRPH2P23942 346 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 GCAP28676 217 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 SOX3P41225 446 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ASMTP46597 345 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 HNRNPFP52597 415 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 NAGLUP54802 743 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 KCNK10P57789 538 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ERVK-8P63133 956 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 SNRPNP63162 240 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 SLC18A2Q05940 514 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ZNF763Q0D2J5 394 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 EFR3AQ14156 821 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 RPS6KA2Q15349 733 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ZNHIT3Q15649 155 aaPredicted RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ZNF630Q2M218 657 aaPredicted RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 VPS26BQ4G0F5 336 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 UNC50Q53HI1 259 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 SP5Q6BEB4 398 aaPredicted RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 SLC30A6Q6NXT4 461 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 LRIG3Q6UXM1 1119 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 R3HCC1LQ7Z5L2 792 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 LIX1Q8N485 282 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 CPSF7Q8N684 471 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 CCNYL1Q8N7R7 359 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 TMEM52Q8NDY8 209 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 CEP70Q8NHQ1 597 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 UHMK1Q8TAS1 419 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 TM4SF18Q96CE8 201 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 MTERF3Q96E29 417 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 LCORQ96JN0 433 aaPredicted RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ZIM3Q96PE6 472 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 DOHHQ9BU89 302 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 TMEM109Q9BVC6 243 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 MRPL1Q9BYD6 325 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 WWTR1Q9GZV5 400 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 MID1IP1Q9NPA3 183 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 MIEF1Q9NQG6 463 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ZNF358Q9NW07 568 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 UTS2RQ9UKP6 389 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 ERVK-19Q9WJR5 959 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 PLLPQ9Y342 182 aa8.35□□□□□ -1.07
ATXN2-223ENST00000551551 MRPS18CQ9Y3D5 142 aaKnown RBP8.35□□□□□ -1.07
ATXN2-223ENST00000551551 POLEQ07864 2286 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CPAMD8Q8IZJ3 1885 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 SHANK1Q9Y566 2161 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 OR6C70A6NIJ9 312 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 PGRMC2O15173 223 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 PCDH7O60245 1069 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 NPHS1O60500 1241 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 PLIN3O60664 434 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 SH3BGRLO75368 114 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 ERAL1O75616 437 aaKnown RBP8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CBR3O75828 277 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 GLSO94925 669 aaPredicted RBP8.34□□□□□ -1.07
ATXN2-223ENST00000551551 OR6B1O95007 311 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CLDN14O95500 239 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 ANXA4P09525 319 aaPredicted RBP8.34□□□□□ -1.07
ATXN2-223ENST00000551551 FAM153BP0C7A2 387 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 DDCP20711 480 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CAPN3P20807 821 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CHRNB4P30926 498 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 LCN1P31025 176 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 MAN2A2P49641 1150 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 MAD2L1Q13257 205 aaPredicted RBP8.34□□□□□ -1.07
ATXN2-223ENST00000551551 EBPQ15125 230 aaKnown RBP8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CEBPEQ15744 281 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 PRICKLE4Q2TBC4 344 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 FAM153CQ494X1 144 aa8.34□□□□□ -1.07
ATXN2-223ENST00000551551 CYP27C1Q4G0S4 372 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms