RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SPAG6O75602 509 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 GNA14O95837 355 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 JCHAINP01591 159 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TRBC1P01850 177 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 UMODP07911 640 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SPTBP11277 2137 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 F3P13726 295 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SELLP14151 372 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ELAVL4P26378 380 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PTPN4P29074 926 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 EEF1DP29692 281 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ALDH4A1P30038 563 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 STX2P32856 288 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PIGAP37287 484 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SPINT3P49223 89 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SULT1E1P49888 294 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PNLIPRP2P54317 469 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 AIF1P55008 147 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 STX17P56962 302 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RIPPLY3P57055 190 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TAS2R40P59535 323 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RPS18P62269 152 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SLC25A11Q02978 314 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 FOXM1Q08050 763 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 IL10RBQ08334 325 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DMPKQ09013 629 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ELP6Q0PNE2 266 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF235Q14590 738 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 IL11RAQ14626 422 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RFTN1Q14699 578 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PCLAFQ15004 111 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CAMK4Q16566 473 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TAZQ16635 292 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 EXOC3L4Q17RC7 722 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PNLIPRP3Q17RR3 467 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DEFB109BQ30KR1 87 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 MMEL1Q495T6 779 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CDONQ4KMG0 1287 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 IGSF11Q5DX21 431 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DNTTIP2Q5QJE6 756 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DCAF10Q5QP82 559 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 LRIF1Q5T3J3 769 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DCAF12Q5T6F0 453 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 FAM199XQ6PEV8 388 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PQLC2Q6ZP29 291 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CFAP77Q6ZQR2 320 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM26Q6ZUK4 368 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ASB18Q6ZVZ8 466 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TAOK1Q7L7X3 1001 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TAF8Q7Z7C8 310 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SLFN11Q7Z7L1 901 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 KCNMB4Q86W47 210 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PSTKQ8IV42 348 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 MCOLN2Q8IZK6 566 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DSELQ8IZU8 1212 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TTC30BQ8N4P2 665 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 POGLUT1Q8NBL1 392 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 KCTD6Q8NC69 237 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM35BQ8NCS4 154 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 C7orf57Q8NEG2 295 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 FAM172AQ8WUF8 416 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ITLN2Q8WWU7 325 aaPredicted RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RPL36ALQ969Q0 106 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ERGIC1Q969X5 290 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PNPLA2Q96AD5 504 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SLC22A18Q96BI1 424 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TBC1D31Q96DN5 1066 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CELF6Q96J87 481 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RADILQ96JH8 1075 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 GDAP1L1Q96MZ0 367 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ZNF599Q96NL3 588 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TSGA13Q96PP4 275 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CSPG4P5Q96PW8 444 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TAAR6Q96RI8 345 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ERGIC2Q96RQ1 377 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SH3GL2Q99962 352 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TMEM79Q9BSE2 394 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SNRNP25Q9BV90 132 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TBC1D10AQ9BXI6 508 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TDRD1Q9BXT4 1180 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 MRPL1Q9BYD6 325 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PITPNM3Q9BZ71 974 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 KLHL4Q9C0H6 718 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 STRADBQ9C0K7 418 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CHRNA10Q9GZZ6 450 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ING2Q9H160 280 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CXXC4Q9H2H0 198 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 DPEP2Q9H4A9 486 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ACTL8Q9H568 366 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 RABEP2Q9H5N1 569 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 WDR26Q9H7D7 661 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 CLK4Q9HAZ1 481 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PLAC1Q9HBJ0 212 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 SAMSN1Q9NSI8 373 aaKnown RBP2.22□□□□□ -2.05
CPSF6-207ENST00000551516 ASF1BQ9NVP2 202 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 GPATCH2LQ9NWQ4 482 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 HIF1ANQ9NWT6 349 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 PSD3Q9NYI0 1048 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 TAB2Q9NYJ8 693 aa2.22□□□□□ -2.05
CPSF6-207ENST00000551516 COX16Q9P0S2 106 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms