RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HBEGFQ99075 208 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 TRIM8Q9BZR9 551 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 OR51B5Q9H339 312 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 TRIM45Q9H8W5 580 aaPredicted RBP12.45□□□□□ -0.42
NUP188-211ENST00000550219 NMRK1Q9NWW6 199 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 HPF1Q9NWY4 346 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 SIRT5Q9NXA8 310 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 VPS29Q9UBQ0 182 aa12.45□□□□□ -0.42
NUP188-211ENST00000550219 G3V3Y1 287 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 CDK2AP1O14519 115 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 LSM1O15116 133 aaKnown RBP12.44□□□□□ -0.42
NUP188-211ENST00000550219 RGS14O43566 566 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 OR2J2O76002 312 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 ZFAND5O76080 213 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 PDE9AO76083 593 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 AGAP20933 346 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 PTGS2P35354 604 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 LIM2P55344 173 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 HMGCS1Q01581 520 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 PLGLB1Q02325 96 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 ID2Q02363 134 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 TGM3Q08188 693 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 KIAA0040Q15053 153 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 ELAVL1Q15717 326 aaKnown RBP12.44□□□□□ -0.42
NUP188-211ENST00000550219 ABHD17CQ6PCB6 329 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 ZNF595Q8IYB9 648 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 EID3Q8N140 333 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 SRFBP1Q8NEF9 429 aaKnown RBP12.44□□□□□ -0.42
NUP188-211ENST00000550219 RFWD2Q8NHY2 731 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 ACTRT2Q8TDY3 377 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 CA5BP1Q8WTZ4 195 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 PHF10Q8WUB8 498 aaKnown RBP12.44□□□□□ -0.42
NUP188-211ENST00000550219 CHTF18Q8WVB6 975 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 F2RL3Q96RI0 385 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 ZNF717Q9BY31 904 aaPredicted RBP12.44□□□□□ -0.42
NUP188-211ENST00000550219 TIMMDC1Q9NPL8 285 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 DAPP1Q9UN19 280 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 SLC12A4Q9UP95 1085 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 CLDN16Q9Y5I7 305 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 CLCA3PQ9Y6N3 262 aa12.44□□□□□ -0.42
NUP188-211ENST00000550219 FAM166BA8MTA8 275 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 E9PLN8 166 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 WWP2O00308 870 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 RTCAO00442 366 aaKnown RBP12.43□□□□□ -0.42
NUP188-211ENST00000550219 PLPP1O14494 284 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 LDB3O75112 727 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 OR6B1O95007 311 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 SCELO95171 688 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 TROVE2P10155 538 aaKnown RBP eCLIP12.43□□□□□ -0.42
NUP188-211ENST00000550219 TNNI3P19429 210 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 BSGP35613 385 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 SOX3P41225 446 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 KIR3DL1P43629 444 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 IDH3AP50213 366 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 AQP5P55064 265 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 STX4Q12846 297 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 SMU1Q2TAY7 513 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 SLC9B1Q4ZJI4 515 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 CMPK2Q5EBM0 449 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 IL20RBQ6UXL0 311 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 LARP4Q71RC2 724 aaKnown RBP eCLIP12.43□□□□□ -0.42
NUP188-211ENST00000550219 ARMC10Q8N2F6 343 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 METTL4Q8N3J2 472 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 TMEM132CQ8N3T6 1108 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 PSD4Q8NDX1 1056 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 FAM57AQ8TBR7 257 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 RGMAQ96B86 450 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 FCRL1Q96LA6 429 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 PPP3R2Q96LZ3 170 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 DMRTA2Q96SC8 542 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 VKORC1Q9BQB6 163 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 OR8D2Q9GZM6 311 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 DEFB127Q9H1M4 99 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 AKTIPQ9H8T0 292 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 LRTM1Q9HBL6 345 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 NPHS2Q9NP85 383 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 PRDM7Q9NQW5 492 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 C1orf109Q9NX04 203 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 COQ3Q9NZJ6 369 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 KLHL14Q9P2G3 628 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 ITGB1BP2Q9UKP3 347 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 YARS2Q9Y2Z4 477 aaKnown RBP12.43□□□□□ -0.42
NUP188-211ENST00000550219 CENPEQ02224 2701 aa12.43□□□□□ -0.42
NUP188-211ENST00000550219 NCOA6Q14686 2063 aaPredicted RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 CREBBPQ92793 2442 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 A0A0G2JMM0 328 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 ATP6AP2A0A1C7CYW4 349 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 A0A1W2PPB8 328 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 A0A1W2PRS3 328 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 PINLYPA6NC86 204 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 FAM90A27PA6NNH2 459 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 KIR3DP1A8MWS1 328 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 ACOT7O00154 380 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 SAP18O00422 153 aaKnown RBP12.42□□□□□ -0.42
NUP188-211ENST00000550219 CYR61O00622 381 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 ADAM10O14672 748 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 ATP6AP2O75787 350 aa12.42□□□□□ -0.42
NUP188-211ENST00000550219 EPHA3P29320 983 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms