RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 FMO2Q99518 471 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 DTX4Q9Y2E6 619 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 PCDHGB3Q9Y5G1 929 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 KIAA1549Q9HCM3 1950 aa15.96■□□□□ 0.15
CHMP1A-205ENST00000548650 TP53I11O14683 189 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 KLK1P06870 262 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 SBK3P0C264 359 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 COL6A2P12110 1019 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 GPX3P22352 226 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 GDF1P27539 372 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 TRPC1P48995 793 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 TMED10P49755 219 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 DLX5P56178 289 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 GALNT1Q10472 559 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 SLC25A35Q3KQZ1 300 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 RIPPLY2Q5TAB7 128 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 FNDC7Q5VTL7 733 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 TTC19Q6DKK2 380 aaPredicted RBP15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 LETMD1Q6P1Q0 360 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 PAGE2Q7Z2X7 111 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 CLYBLQ8N0X4 340 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 METTL4Q8N3J2 472 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 MMGT1Q8N4V1 131 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 C17orf47Q8NEP4 570 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 OR4K14Q8NGD5 310 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 SPPL2AQ8TCT8 520 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 RILPQ96NA2 401 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 ZNF559Q9BR84 538 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 OR10A5Q9H207 317 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 MRPL46Q9H2W6 279 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 UBQLN3Q9H347 655 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 ELOVL6Q9H5J4 265 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 FARSBQ9NSD9 589 aaKnown RBP15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 ZNF180Q9UJW8 692 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 L3MBTL1Q9Y468 752 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 NPFFR2Q9Y5X5 522 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 MTORP42345 2549 aa15.95■□□□□ 0.14
CHMP1A-205ENST00000548650 A8MT66 165 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 TRIM49D1C9J1S8 452 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 PPP6CO00743 305 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 KRT38O76015 456 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 URI1O94763 535 aaPredicted RBP15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 S1PR1P21453 382 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 NT5EP21589 574 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 XKP51811 444 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 MAPK12P53778 367 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 CRYZQ08257 329 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 DUSP8Q13202 625 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 SGO1Q5FBB7 561 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 CCNYL2Q5T2Q4 361 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 HLA-DQA1Q5Y7H0 255 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 SLC48A1Q6P1K1 146 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 SPNS3Q6ZMD2 512 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 MILR1Q7Z6M3 343 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 PRR22Q8IZ63 422 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 MMP21Q8N119 569 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 VWA5B2Q8N398 1253 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 LIX1Q8N485 282 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 TMEM151AQ8N4L1 468 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 NTNG2Q96CW9 530 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 SECISBP2Q96T21 854 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 MRPL57Q9BQC6 102 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 C1QTNF3Q9BXJ4 246 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 ANGPTL4Q9BY76 406 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 TSPYL1Q9H0U9 437 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 NXF5Q9H1B4 397 aaKnown RBP15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 ALKBH4Q9NXW9 302 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 AHSPQ9NZD4 102 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 CES1P1Q9UKY3 287 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 SLC12A4Q9UP95 1085 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 C15orf41Q9Y2V0 281 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 PCDHA9Q9Y5H5 950 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 IKBKGQ9Y6K9 419 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 AKAP6Q13023 2319 aa15.94■□□□□ 0.14
CHMP1A-205ENST00000548650 MED12Q93074 2177 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 C15orf38-AP3S2A0A0A6YYH1 394 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 CAPN14A8MX76 684 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 FAM47E-STBD1D6RA91 191 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 OTCP00480 354 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 ATP1B1P05026 303 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 PORP16435 677 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 TSPAN8P19075 237 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 CNTFP26441 200 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 SOX18P35713 384 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 CDH13P55290 713 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 MYBPHQ13203 477 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 NNATQ16517 81 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 PRICKLE4Q2TBC4 344 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 ACSF3Q4G176 576 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 C6orf163Q5TEZ5 329 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 TMEM198Q66K66 360 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 WDR53Q7Z5U6 358 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 TMEM200AQ86VY9 491 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 RELL2Q8NC24 303 aaPredicted RBP15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 NAXEQ8NCW5 288 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 MYRIPQ8NFW9 859 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 OR7G1Q8NGA0 311 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 DOCK7Q96N67 2140 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 SLC24A3Q9HC58 644 aa15.93■□□□□ 0.14
CHMP1A-205ENST00000548650 MAT2BQ9NZL9 334 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms