RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ATF7IP2Q5U623 682 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 LCN1P1Q5VSP4 162 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF772Q68DY9 489 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TCEAL6Q6IPX3 200 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TRMT1LQ7Z2T5 733 aaKnown RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TRMT11Q7Z4G4 463 aaKnown RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GOLGA7Q7Z5G4 137 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 CBWD2Q8IUF1 395 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 PLD3Q8IV08 490 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TTC5Q8N0Z6 440 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 DCLK2Q8N568 766 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 CCDC185Q8N715 623 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF114Q8NC26 417 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 OR7A2PQ8NGA2 310 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 OR8J1Q8NGP2 316 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF473Q8WTR7 871 aaKnown RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TMEM37Q8WXS4 190 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 HSD17B8Q92506 261 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 RTP4Q96DX8 246 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 SLC41A3Q96GZ6 507 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 LRR1Q96L50 414 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF385AQ96PM9 386 aaKnown RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 NDUFAF3Q9BU61 184 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 POLR3CQ9BUI4 534 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 C1QTNF4Q9BXJ3 329 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GON7Q9BXV9 100 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 OR2B2Q9GZK3 357 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 FAM192AQ9GZU8 254 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 WWP1Q9H0M0 922 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 FAM49AQ9H0Q0 323 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 RPAP3Q9H6T3 665 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 METTL7AQ9H8H3 244 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 S100A14Q9HCY8 104 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 SLC52A3Q9NQ40 469 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 SDR39U1Q9NRG7 319 aaPredicted RBP3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ECHDC1Q9NTX5 307 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 ETNK2Q9NVF9 386 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 TBC1D13Q9NVG8 400 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 POLKQ9UBT6 870 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 POU2F3Q9UKI9 436 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 PILRBQ9UKJ0 227 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 B9D1Q9UPM9 204 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 A2ML1A8K2U0 1454 aa3.79□□□□□ -1.8
SCAF11-210ENST00000547654 GOLGB1Q14789 3259 aaKnown RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 JCADQ9P266 1359 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CTTNBP2Q8WZ74 1663 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 IGLV5-37A0A075B6J1 123 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 A0A0U1RQS6 177 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 A0A1W2PPI3 338 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 L7N2F9 121 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CLDN5O00501 218 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 FPGTO14772 594 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CFLARO15519 480 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ECE2O60344 883 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SNNO75324 88 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 BCAS1O75363 584 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 NDUFA7O95182 113 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 PMS2P2O95744 297 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 EML2O95834 649 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 TXNDC12O95881 172 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 VTNP04004 478 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 UQCRFS1P1P0C7P4 283 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 DBTP11182 482 aaKnown RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 EFNA1P20827 205 aaPredicted RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CA6P23280 308 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 PSMA2P25787 234 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CCR4P51679 360 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 LBX1P52954 281 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 PRRX1P54821 245 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 HERVK_113P63132 956 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ERVK-8P63133 956 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CDKL1Q00532 357 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CNTN2Q02246 1040 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 NCBP1Q09161 790 aaKnown RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 CNTN1Q12860 1018 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SELPLGQ14242 412 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 MEF2DQ14814 521 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 KIR2DS3Q14952 304 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 WDR43Q15061 677 aaKnown RBP eCLIP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 OR1C1Q15619 314 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 DCAF4L1Q3SXM0 396 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 KRT71Q3SY84 523 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 LRRC37A5PQ49AS3 106 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SEL1L3Q68CR1 1132 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 OR4C11Q6IEV9 310 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SLC39A4Q6P5W5 647 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 RFPL4BQ6ZWI9 263 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ASRGL1Q7L266 308 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 G2E3Q7L622 706 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 C16orf62Q7Z3J2 963 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 P4HA3Q7Z4N8 544 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 GPBP1Q86WP2 473 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ZC3H3Q8IXZ2 948 aaKnown RBP3.78□□□□□ -1.8
SCAF11-210ENST00000547654 UBE2J2Q8N2K1 259 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 PARP8Q8N3A8 854 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF671Q8TAW3 534 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 RAET1EQ8TD07 263 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 OSTF1Q92882 214 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 SLC35C1Q96A29 364 aa3.78□□□□□ -1.8
SCAF11-210ENST00000547654 RASD2Q96D21 266 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms