RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 RPL17P18621 184 aaKnown RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 GIPRP48546 466 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 AGFG1P52594 562 aaKnown RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 ATP12AP54707 1039 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 GAS1P54826 345 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 CTBP2P56545 445 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SNRPD1P62314 119 aaKnown RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 BTG1P62324 171 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 COX10Q12887 443 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 ELAVL2Q12926 359 aaKnown RBP13.45□□□□□ -0.26
SRP54-202ENST00000546080 NDUFA9Q16795 377 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 KIAA1211LQ6NV74 962 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 FAM180BQ6P0A1 224 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SLC36A4Q6YBV0 504 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 TIGD4Q8IY51 512 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 OR4D11Q8NGI4 311 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 NEIL3Q8TAT5 605 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SOCS4Q8WXH5 440 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 TMEM159Q96B96 161 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 OTULINQ96BN8 352 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 TMED9Q9BVK6 235 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 SLC6A16Q9GZN6 736 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 NT5DC2Q9H857 520 aa13.45□□□□□ -0.26
SRP54-202ENST00000546080 ANKDD1BA6NHY2 528 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 I3L521 148 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 PRODHO43272 600 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 CHP2O43745 196 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 LZTS3O60299 673 aaPredicted RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 SCO1O75880 301 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 OR7A10O76100 309 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 HK1P19367 917 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 MMP11P24347 488 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 WEE1P30291 646 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 SOX18P35713 384 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 PREPP48147 710 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 SMSP52788 366 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 CSTF1Q05048 431 aaKnown RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 LRRC32Q14392 662 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 FCN2Q15485 313 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 PODNL1Q6PEZ8 512 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 TRILQ7L0X0 811 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 SHFQ7M4L6 423 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 METTL3Q86U44 580 aaKnown RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 SLC51BQ86UW2 128 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 SLC9A6Q92581 669 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 UCN3Q969E3 161 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 ECHDC3Q96DC8 303 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 SENP5Q96HI0 755 aaPredicted RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 ARHGAP9Q9BRR9 750 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 FUZQ9BT04 418 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 TBC1D17Q9HA65 648 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 C12orf10Q9HB07 376 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 MRPS18AQ9NVS2 196 aaKnown RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 B4GALT6Q9UBX8 382 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 SEC14L3Q9UDX4 400 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 FBXW2Q9UKT8 454 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 MGAT4AQ9UM21 535 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 PPIL1Q9Y3C6 166 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 A0A0A6YYJ9 748 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 OR5K3A6NET4 321 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 CDK2AP1O14519 115 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 EPHX1P07099 455 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 CFL1P23528 166 aaKnown RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 MTNR1AP48039 350 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 KCNJ5P48544 419 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 GATMP50440 423 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 CDK5Q00535 292 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 RGS1Q08116 209 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 LMAN2Q12907 356 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 PIN1Q13526 163 aaPredicted RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 KCNA10Q16322 511 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 MPPE1Q53F39 396 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 MMP21Q8N119 569 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 FBXL6Q8N531 539 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 DNAJC5GQ8N7S2 189 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 ZNF680Q8NEM1 530 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 RSPO3Q9BXY4 272 aaPredicted RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 ZDHHC6Q9H6R6 413 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 RANBP3Q9H6Z4 567 aaPredicted RBP13.44□□□□□ -0.26
SRP54-202ENST00000546080 TAAR2Q9P1P5 351 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 ZNF222Q9UK12 451 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 ACAD8Q9UKU7 415 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 DYRK1BQ9Y463 629 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 AUP1Q9Y679 476 aa13.44□□□□□ -0.26
SRP54-202ENST00000546080 CENPFP49454 3210 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 ANHXE9PGG2 379 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 GABRPO00591 440 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 KLHL18O94889 574 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 CELF2O95319 508 aaKnown RBP13.43□□□□□ -0.26
SRP54-202ENST00000546080 CYBAP13498 195 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 SLC6A1P30531 599 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 OR1D2P34982 312 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 CD79BP40259 229 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 DSG2Q14126 1118 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 GPR176Q14439 515 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 MINDY4Q4G0A6 757 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 BCL2L15Q5TBC7 163 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 HIST2H2AA3Q6FI13 130 aa13.43□□□□□ -0.26
SRP54-202ENST00000546080 CD300LDQ6UXZ3 194 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms