RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 LMLNQ96KR4 655 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 RIOK2Q9BVS4 552 aaKnown RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 NLNQ9BYT8 704 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 MIXL1Q9H2W2 232 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 PLSCR3Q9NRY6 295 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 TXNL4BQ9NX01 149 aaKnown RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 NUFIP1Q9UHK0 495 aaKnown RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 SLC25A13Q9UJS0 675 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 DYRK1BQ9Y463 629 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 MAU2Q9Y6X3 613 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 PIPSLA2A3N6 862 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 B4DXG7 233 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 PLD2O14939 933 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 SEC14L5O43304 696 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 TMCC2O75069 709 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 ALX3O95076 343 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 ALPPP05187 535 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 C1GALT1C1LP0DN25 315 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 MYL9P24844 172 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 ELAVL4P26378 380 aaKnown RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 HLA-FP30511 346 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 OPRD1P41143 372 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 ETV3P41162 512 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 HNRNPA0Q13151 305 aaKnown RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 TSTA3Q13630 321 aaPredicted RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 RPS26P11Q5JNZ5 115 aaPredicted RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 SLC35F1Q5T1Q4 408 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 PAQR6Q6TCH4 344 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 CEACAM20Q6UY09 585 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 Q6ZVU0 165 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 ZNF438Q7Z4V0 828 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 WDR53Q7Z5U6 358 aaPredicted RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 TCEANCQ8N8B7 351 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 GRPEL2Q8TAA5 225 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 FRMD6Q96NE9 622 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 C11orf54Q9H0W9 315 aaPredicted RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 POLR2J3Q9H1A7 115 aaKnown RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 RANGRFQ9HD47 186 aaPredicted RBP10.87□□□□□ -0.67
DDB1-224ENST00000545894 MIEF1Q9NQG6 463 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 SH2B3Q9UQQ2 575 aa10.87□□□□□ -0.67
DDB1-224ENST00000545894 A0A1W2PQL4 384 aaPredicted RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 SHISA7A6NL88 538 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 BCHEP06276 602 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 H1F0P07305 194 aaKnown RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 IL3P08700 152 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 NPPBP16860 134 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 PRKCAP17252 672 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 MLLT3P42568 568 aaPredicted RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 DGKGP49619 791 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 PRLHRP49683 370 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 COL4A3Q01955 1670 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 CHRNEQ04844 493 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 YIF1BQ5BJH7 314 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 HENMT1Q5T8I9 393 aaKnown RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 DDI2Q5TDH0 399 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 TCTN3Q6NUS6 607 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 BRAT1Q6PJG6 821 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 HSDL2Q6YN16 418 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 USP30Q70CQ3 517 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 IKBIPQ70UQ0 350 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 BCDIN3DQ7Z5W3 292 aaKnown RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 GPR32P1Q8NGA4 272 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 DHRS1Q96LJ7 313 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 FYTTD1Q96QD9 318 aaKnown RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 TEFMQ96QE5 360 aaKnown RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 NELL2Q99435 816 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 ZSCAN5AQ9BUG6 496 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 SLC6A16Q9GZN6 736 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 CXorf36Q9H7Y0 433 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 RNF121Q9H920 327 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 A4GALTQ9NPC4 353 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 PLEKHB1Q9UF11 243 aaPredicted RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 HCN2Q9UL51 889 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 DIMT1Q9UNQ2 313 aaKnown RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 ICKQ9UPZ9 632 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 PIAS3Q9Y6X2 628 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 NOTOA8MTQ0 251 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 NDUFB5O43674 189 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 SEMA7AO75326 666 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 TSPAN19P0C672 248 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 CLEC2LP0C7M8 214 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 MSL3P1P0C860 447 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 CPEP16870 476 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 PDHA2P29803 388 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 SLC9A3P48764 834 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 ZNF284Q2VY69 593 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 SNAP47Q5SQN1 464 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 C22orf42Q6IC83 251 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 PGBD2Q6P3X8 592 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 SFTPA1Q8IWL2 248 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 HORMAD2Q8N7B1 307 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 OR7G1Q8NGA0 311 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 SLC38A5Q8WUX1 472 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 TRIM63Q969Q1 353 aa10.86□□□□□ -0.67
DDB1-224ENST00000545894 KIAA1143Q96AT1 154 aaPredicted RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 C8orf33Q9H7E9 229 aaPredicted RBP10.86□□□□□ -0.67
DDB1-224ENST00000545894 WDR70Q9NW82 654 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms