RNA–Protein interactions for RNA: ENST00000545518.1

IST1-223, Transcript of IST1, ESCRT-III associated factor, human

TSL 2

Gene IST1, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IST1-223	ENST00000545518	PCSK2	P16519	638 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	NTS	P30990	170 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	CD97	P48960	835 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	NCBP2	P52298	156 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
IST1-223	ENST00000545518	MRPS35	P82673	323 aa	Known RBP	11.19	□□□□□ -0.62
IST1-223	ENST00000545518	DUSP8	Q13202	625 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	EXOSC7	Q15024	291 aa	Known RBP	11.19	□□□□□ -0.62
IST1-223	ENST00000545518	CPTP	Q5TA50	214 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	C6orf163	Q5TEZ5	329 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	TMEM198	Q66K66	360 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	RNF111	Q6ZNA4	994 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	ACAD11	Q709F0	780 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	C9orf40	Q8IXQ3	194 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	FAM9C	Q8IZT9	166 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	LGI4	Q8N135	537 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	BEST3	Q8N1M1	668 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.19	□□□□□ -0.62
IST1-223	ENST00000545518	OR7G1	Q8NGA0	311 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	OR5L2	Q8NGL0	311 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	HAS2	Q92819	552 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	KAT2A	Q92830	837 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	THOC1	Q96FV9	657 aa	Known RBP	11.19	□□□□□ -0.62
IST1-223	ENST00000545518	PRPF18	Q99633	342 aa	Known RBP	11.19	□□□□□ -0.62
IST1-223	ENST00000545518	DPY30	Q9C005	99 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	OR10A5	Q9H207	317 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	EPS8L2	Q9H6S3	715 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	NPHS2	Q9NP85	383 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	TCF7L2	Q9NQB0	619 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	FGFR1OP2	Q9NVK5	253 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	2e-6	■■□□□ 12
IST1-223	ENST00000545518	PLA2G3	Q9NZ20	509 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	MYOT	Q9UBF9	498 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	MAPRE3	Q9UPY8	281 aa		11.19	□□□□□ -0.62
IST1-223	ENST00000545518	OR6C76	A6NM76	312 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	UBD	O15205	165 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	PLOD3	O60568	738 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	DPM1	O60762	260 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	WDPCP	O95876	746 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	VIM	P08670	466 aa	Known RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	IDO1	P14902	403 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	DDX5	P17844	614 aa	Known RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ST13	P50502	369 aa	Known RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	MANF	P55145	182 aa	Known RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	NME5	P56597	212 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	UFM1	P61960	85 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	GSTA3	Q16772	222 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	PGS1	Q32NB8	556 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	FHL5	Q5TD97	284 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ZNF551	Q7Z340	670 aa	Predicted RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	CAMKMT	Q7Z624	323 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ZADH2	Q8N4Q0	377 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	OR7G2	Q8NG99	324 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	C16orf52	Q8NHV5	167 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	RFWD2	Q8NHY2	731 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	NUBPL	Q8TB37	319 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	STON2	Q8WXE9	905 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	TM9SF4	Q92544	642 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ERP27	Q96DN0	273 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ELP4	Q96EB1	424 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ZBED6CL	Q96FA7	236 aa	Predicted RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	MARK4	Q96L34	752 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	TEX37	Q96LM6	180 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	SIKE1	Q9BRV8	207 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	CCDC28B	Q9BUN5	200 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	WWTR1	Q9GZV5	400 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	RNF32	Q9H0A6	362 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ANKRA2	Q9H9E1	313 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.18	□□□□□ -0.62
IST1-223	ENST00000545518	ATAD3A	Q9NVI7	634 aa		11.18	□□□□□ -0.62
IST1-223	ENST00000545518		A0A087WV62	115 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	DYTN	A2CJ06	578 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	WWP2	O00308	870 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	PLOD2	O00469	737 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	POLR3G	O15318	223 aa	Predicted RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	ITGA10	O75578	1167 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	BCAS2	O75934	225 aa	Predicted RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	OR2J2	O76002	312 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	SLITRK5	O94991	958 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	F10	P00742	488 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	EFNA1	P20827	205 aa	Predicted RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	IL12A	P29459	219 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	EMD	P50402	254 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	CLNS1A	P54105	237 aa	Known RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	GYS2	P54840	703 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	WNT3	P56703	355 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	PHC1	P78364	1004 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	HSPB3	Q12988	150 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	MLC1	Q15049	377 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	EBP	Q15125	230 aa	Known RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	RPS6KA2	Q15349	733 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	PDCD4	Q53EL6	469 aa	Known RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.17	□□□□□ -0.62
IST1-223	ENST00000545518	CGB2	Q6NT52	195 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	TMEM107	Q6UX40	140 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518		Q6ZS92	163 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	SLC29A4	Q7RTT9	530 aa		11.17	□□□□□ -0.62
IST1-223	ENST00000545518	PTRH1	Q86Y79	214 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms