RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 MRPL57Q9BQC6 102 aaKnown RBP7.14□□□□□ -1.27
SNHG1-223ENST00000545440 G6PC3Q9BUM1 346 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 ZNF717Q9BY31 904 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-223ENST00000545440 DEFB126Q9BYW3 111 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 MRPL46Q9H2W6 279 aaKnown RBP7.14□□□□□ -1.27
SNHG1-223ENST00000545440 CDCP1Q9H5V8 836 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 IPPKQ9H8X2 491 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 PNO1Q9NRX1 252 aaKnown RBP7.14□□□□□ -1.27
SNHG1-223ENST00000545440 MS4A12Q9NXJ0 267 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 ANKRD10Q9NXR5 420 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 PSD3Q9NYI0 1048 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 LRFN1Q9P244 771 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 PLEKHB1Q9UF11 243 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-223ENST00000545440 FETUBQ9UGM5 382 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 PHF11Q9UIL8 331 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 ZNF223Q9UK11 482 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-223ENST00000545440 PCTPQ9UKL6 214 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 CLCA3PQ9Y6N3 262 aa7.14□□□□□ -1.27
SNHG1-223ENST00000545440 A0A0A6YYD5 115 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 A0A1B0GUH1 482 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 LRRC14BA6NHZ5 514 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 A8MUA0 341 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 FOXE1O00358 373 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 RTCAO00442 366 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OR7A17O14581 309 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 RIPK2O43353 540 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 ITGA10O75578 1167 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 DNAJC8O75937 253 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 UNC5CO95185 931 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 CLDN9O95484 217 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 HPXP02790 462 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 SP1P08047 785 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 SNRPAP09012 282 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 COX7A2P14406 83 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 CPN2P22792 545 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 PTX3P26022 381 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 MST1P26927 711 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 GCAP28676 217 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 ARL1P40616 181 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 HLCSP50747 726 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 CCNG1P51959 295 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 RPS13P62277 151 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 IGLV3-21P80748 117 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 PLIN5Q00G26 463 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 PMP22Q01453 160 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 TRAF3Q13114 568 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 BIKQ13323 160 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 LGSNQ5TDP6 509 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 SPINK14Q6IE38 97 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OR4C11Q6IEV9 310 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 GFRALQ6UXV0 394 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 TIFABQ6ZNK6 161 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 GALNTL5Q7Z4T8 443 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 FGD2Q7Z6J4 655 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 NUDT13Q86X67 352 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 GPALPP1Q8IXQ4 340 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 EIF1ADQ8N9N8 165 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 MORN4Q8NDC4 146 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OR52B6Q8NGF0 335 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OR8K3Q8NH51 312 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OR2W6PQ8NHA6 318 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 WDR20Q8TBZ3 569 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 TMEM125Q96AQ2 219 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 SCYL1Q96KG9 808 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 MTERF1Q99551 399 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 KCNJ15Q99712 375 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 MAPKAP1Q9BPZ7 522 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 CCDC77Q9BR77 488 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 NTMT1Q9BV86 223 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 C1QTNF3Q9BXJ4 246 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 HES7Q9BYE0 225 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 ALOXE3Q9BYJ1 711 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 TXLNGYQ9BZA5 131 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OR51B5Q9H339 312 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 NOL11Q9H8H0 719 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 DDX31Q9H8H2 851 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 KLHL1Q9NR64 748 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 LYARQ9NX58 379 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 SEC14L3Q9UDX4 400 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 OSGIN2Q9Y236 505 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 KLF13Q9Y2Y9 288 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 RNF11Q9Y3C5 154 aa7.13□□□□□ -1.27
SNHG1-223ENST00000545440 UTP20O75691 2785 aaKnown RBP7.13□□□□□ -1.27
SNHG1-223ENST00000545440 PKDREJQ9NTG1 2253 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 UNC79Q9P2D8 2635 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 IQANK1A0A1B0GTG1 560 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 A8MT66 165 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 C17orf105B2RV13 164 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 SAP18O00422 153 aaKnown RBP7.12□□□□□ -1.27
SNHG1-223ENST00000545440 LRRTM2O43300 516 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 FGF17O60258 216 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 LDB3O75112 727 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 SH3BGRLO75368 114 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 ZFAND5O76080 213 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 ETHE1O95571 254 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 OTCP00480 354 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 IFNA16P05015 189 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 RNASE1P07998 156 aaKnown RBP7.12□□□□□ -1.27
SNHG1-223ENST00000545440 RHOXF2BP0C7M4 288 aa7.12□□□□□ -1.27
SNHG1-223ENST00000545440 NR2F6P10588 404 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms