RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ZNF385CQ66K41 422 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-209ENST00000545305 TNFAIP8L2Q6P589 184 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-209ENST00000545305 CYP2R1Q6VVX0 501 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 SLC30A8Q8IWU4 369 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 PRSS58Q8IYP2 241 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 OR2L13Q8N349 312 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 VWA5B2Q8N398 1253 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 C11orf65Q8NCR3 313 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 OR7G2Q8NG99 324 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 WDR36Q8NI36 951 aaKnown RBP12.9□□□□□ -0.34
SCARB1-209ENST00000545305 STT3BQ8TCJ2 826 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 SLC26A7Q8TE54 656 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 FIG4Q92562 907 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 RIT1Q92963 219 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 FAM162AQ96A26 154 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 NSMCE2Q96MF7 247 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 ZNF578Q96N58 590 aaPredicted RBP12.9□□□□□ -0.34
SCARB1-209ENST00000545305 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 CHST8Q9H2A9 424 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 NECTIN3Q9NQS3 549 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 NXT1Q9UKK6 140 aaKnown RBP12.9□□□□□ -0.34
SCARB1-209ENST00000545305 MKL2Q9ULH7 1088 aa12.9□□□□□ -0.34
SCARB1-209ENST00000545305 SCN2AQ99250 2005 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 EP300Q09472 2414 aaPredicted RBP12.89□□□□□ -0.35
SCARB1-209ENST00000545305 TGFBR3LH3BV60 316 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 UPK1AO00322 258 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 CXCR6O00574 342 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 MGRN1O60291 552 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 PLOD3O60568 738 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 TNFRSF21O75509 655 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 DKK1O94907 266 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 KCNK5O95279 499 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 C1QCP02747 245 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 ALBP02768 609 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 HEXBP07686 556 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 ZGLP1P0C6A0 271 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 NCK1P16333 377 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 ZNF28P17035 718 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 TNNI3P19429 210 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 MATN1P21941 496 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 GALNSP34059 522 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 PCGF2P35227 344 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 ERFP50548 548 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 CASP9P55211 416 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 POLE2P56282 527 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 RPS26P62854 115 aaKnown RBP12.89□□□□□ -0.35
SCARB1-209ENST00000545305 RHAGQ02094 409 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 MAP4K2Q12851 820 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 RIPK1Q13546 671 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 LASP1Q14847 261 aaKnown RBP12.89□□□□□ -0.35
SCARB1-209ENST00000545305 PRICKLE4Q2TBC4 344 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 MTX3Q5HYI7 312 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 GLYATQ6IB77 296 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 FAM111BQ6SJ93 734 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 PTOV1Q86YD1 416 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 C10orf111Q8N326 155 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 HORMAD2Q8N7B1 307 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 MR1Q95460 341 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
SCARB1-209ENST00000545305 VN1R1Q9GZP7 353 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 OR51I1Q9H343 314 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 TMEM38AQ9H6F2 299 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 CXorf21Q9HAI6 301 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 EQTNQ9NQ60 294 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 SLC22A11Q9NSA0 550 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 GPATCH2Q9NW75 528 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 NTMQ9P121 344 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 C19orf53Q9UNZ5 99 aaPredicted RBP12.89□□□□□ -0.35
SCARB1-209ENST00000545305 ANGPT4Q9Y264 503 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 B3GALT1Q9Y5Z6 326 aa12.89□□□□□ -0.35
SCARB1-209ENST00000545305 IGKV3D-11A0A0A0MRZ8 115 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 AQP12BA6NM10 295 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 FKBP6O75344 327 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 STK17BO94768 372 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 HMGN2P05204 90 aaKnown RBP12.88□□□□□ -0.35
SCARB1-209ENST00000545305 CYC1P08574 325 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 NUDT7P0C024 238 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 ARAFP10398 606 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 BMP2P12643 396 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 CEACAM1P13688 526 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 NOVA1P51513 510 aaKnown RBP12.88□□□□□ -0.35
SCARB1-209ENST00000545305 ZNF155Q12901 538 aaPredicted RBP12.88□□□□□ -0.35
SCARB1-209ENST00000545305 SCARB2Q14108 478 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 VEZF1Q14119 521 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 NSDHLQ15738 373 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
SCARB1-209ENST00000545305 C3orf38Q5JPI3 329 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 INTS11Q5TA45 600 aaKnown RBP12.88□□□□□ -0.35
SCARB1-209ENST00000545305 FHL5Q5TD97 284 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 MLIPQ5VWP3 458 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 SPPL2CQ8IUH8 684 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 AQP12AQ8IXF9 295 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 GOLM1Q8NBJ4 401 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 MIPOL1Q8TD10 442 aa12.88□□□□□ -0.35
SCARB1-209ENST00000545305 TSLPQ969D9 159 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms