RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 MGAT5Q09328 741 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 RCAN2Q14206 197 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 TOMM20Q15388 145 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 PPP1R7Q15435 360 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 HIST2H2ACQ16777 129 aaPredicted RBP14.08□□□□□ -0.16
CD4-212ENST00000544344 HIST2H2AA3Q6FI13 130 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 MRM1Q6IN84 353 aaKnown RBP14.08□□□□□ -0.16
CD4-212ENST00000544344 MED27Q6P2C8 311 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 GPSM1Q86YR5 675 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 ZCCHC7Q8N3Z6 543 aaKnown RBP14.08□□□□□ -0.16
CD4-212ENST00000544344 INTS12Q96CB8 462 aaKnown RBP14.08□□□□□ -0.16
CD4-212ENST00000544344 CMTM7Q96FZ5 175 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 PBKQ96KB5 322 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 TM9SF2Q99805 663 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 PELOQ9BRX2 385 aaKnown RBP14.08□□□□□ -0.16
CD4-212ENST00000544344 SNX15Q9NRS6 342 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 CLCF1Q9UBD9 225 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 ASIC3Q9UHC3 531 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 PHF11Q9UIL8 331 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 ASB4Q9Y574 426 aa14.08□□□□□ -0.16
CD4-212ENST00000544344 CHD3Q12873 2000 aaKnown RBP14.07□□□□□ -0.16
CD4-212ENST00000544344 A0A1W2PR48 441 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 GLOD5A6NK44 160 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CAPN14A8MX76 684 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PGRMC1O00264 195 aaKnown RBP14.07□□□□□ -0.16
CD4-212ENST00000544344 TMPRSS11DO60235 418 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 OR10H2O60403 315 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CCNT2O60583 730 aaKnown RBP14.07□□□□□ -0.16
CD4-212ENST00000544344 PCNAP12004 261 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CD1DP15813 335 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PTGDSP41222 190 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PPP2R2BQ00005 443 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PCDH1Q08174 1060 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 ACKR1Q16570 336 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 DESI1Q6ICB0 168 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PRR22Q8IZ63 422 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 GCNT2Q8N0V5 402 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PDIK1LQ8N165 341 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 ZNF615Q8N8J6 731 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 WNT2BQ93097 391 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PERPQ96FX8 193 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 MARK4Q96L34 752 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 WFIKKN1Q96NZ8 548 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CD244Q9BZW8 370 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 PIGMQ9H3S5 423 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 RHOJQ9H4E5 214 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CAB39LQ9H9S4 337 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CXorf21Q9HAI6 301 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 WIF1Q9Y5W5 379 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 ROS1P08922 2347 aa14.07□□□□□ -0.16
CD4-212ENST00000544344 CES2O00748 559 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 EEDO75530 441 aaKnown RBP14.06□□□□□ -0.16
CD4-212ENST00000544344 PIAS1O75925 651 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 ABCB1P08183 1280 aaPredicted RBP14.06□□□□□ -0.16
CD4-212ENST00000544344 CT62P0C5K7 136 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 SLC35E2BP0CK96 405 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 SLC35E2P0CK97 266 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 LOXP28300 417 aaPredicted RBP14.06□□□□□ -0.16
CD4-212ENST00000544344 TLX1P31314 330 aaPredicted RBP14.06□□□□□ -0.16
CD4-212ENST00000544344 KRTAP1-1Q07627 177 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 FAM27E3Q08E93 113 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 FUT7Q11130 342 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 LRRC70Q7Z2Q7 622 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 HUS1BQ8NHY5 278 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 IGFBPL1Q8WX77 278 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 UBE2E3Q969T4 207 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 RGMAQ96B86 450 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 CTHRC1Q96CG8 243 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 LRRC39Q96DD0 335 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 CCL19Q99731 98 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 SMYD2Q9NRG4 433 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 CD274Q9NZQ7 290 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 PACSIN3Q9UKS6 424 aa14.06□□□□□ -0.16
CD4-212ENST00000544344 MTO1Q9Y2Z2 717 aaKnown RBP14.06□□□□□ -0.16
CD4-212ENST00000544344 A0A0A6YYD5 115 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 TP73O15350 636 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 PHGDHO43175 533 aaKnown RBP14.05□□□□□ -0.16
CD4-212ENST00000544344 CCDC166P0CW27 439 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 FPR1P21462 350 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 ABCD3P28288 659 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 SERPINB1P30740 379 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 BSGP35613 385 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 GMPRP36959 345 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 BUD31P41223 144 aaPredicted RBP14.05□□□□□ -0.16
CD4-212ENST00000544344 MC3RP41968 323 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 PCYT1AP49585 367 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 TMED10P49755 219 aaKnown RBP14.05□□□□□ -0.16
CD4-212ENST00000544344 GFRA1P56159 465 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 SRYQ05066 204 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 FASTKD3Q14CZ7 662 aaKnown RBP14.05□□□□□ -0.16
CD4-212ENST00000544344 TMEM81Q6P7N7 255 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 ANGPTL8Q6UXH0 198 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 ANKMY2Q8IV38 441 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 WDSUB1Q8N9V3 476 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 OR1J4Q8NGS1 313 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 ACTRT1Q8TDG2 376 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 HGDQ93099 445 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
CD4-212ENST00000544344 NAP1L3Q99457 506 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms