RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	BCAS2	O75934	225 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZFAND5	O76080	213 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLITRK5	O94991	958 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	DDAH2	O95865	285 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SERPINA7	P05543	415 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	GSN	P06396	782 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CELA2A	P08217	269 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CD1E	P15812	388 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CAPN3	P20807	821 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CHI3L1	P36222	383 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	FRK	P42685	505 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CCT3	P49368	545 aa	Known RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	HBA1	P69905	142 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	PRR5	P85299	388 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	MGAT2	Q10469	447 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	AIMP2	Q13155	320 aa	Known RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	STX5	Q13190	355 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	RCAN2	Q14206	197 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	EXOSC7	Q15024	291 aa	Known RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	MLC1	Q15049	377 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SPRED3	Q2MJR0	410 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	HLA-DQA1	Q5Y7H0	255 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CPZ	Q66K79	652 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	PLAG1	Q6DJT9	500 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	INO80C	Q6PI98	192 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC2A7	Q6PXP3	512 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	HSDL2	Q6YN16	418 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	MSANTD1	Q6ZTZ1	278 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC29A4	Q7RTT9	530 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SNX32	Q86XE0	403 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	TRIML2	Q8N7C3	387 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	AMER2	Q8N7J2	671 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNF321P	Q8N8H1	164 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	NFAM1	Q8NET5	270 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	NUP43	Q8NFH3	380 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR7G2	Q8NG99	324 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR7G1	Q8NGA0	311 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR1N1	Q8NGS0	311 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNF675	Q8TD23	568 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	THAP3	Q8WTV1	239 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ERP27	Q96DN0	273 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ELP4	Q96EB1	424 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	FBXL20	Q96IG2	436 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	THOC3	Q96J01	351 aa	Known RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	CCDC115	Q96NT0	180 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	GAL3ST4	Q96RP7	486 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	INPP5K	Q9BT40	448 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC25A23	Q9BV35	468 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	NUDT9	Q9BW91	350 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR10A5	Q9H207	317 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ANKRA2	Q9H9E1	313 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	NEUROD4	Q9HD90	331 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	MMP25	Q9NPA2	562 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZCCHC3	Q9NUD5	404 aa	Known RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	TAS2R9	Q9NYW1	312 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	PTGFRN	Q9P2B2	879 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	PRODH2	Q9UF12	536 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	BTNL2	Q9UIR0	455 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	LEF1	Q9UJU2	399 aa	Predicted RBP	9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	VPS4A	Q9UN37	437 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	SSUH2	Q9Y2M2	353 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545	ACACA	Q13085	2346 aa		9.46	□□□□□ -0.9
CPSF7-221	ENST00000543545		A0A087WV62	115 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545		A0A1W2PQ72	361 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	PLOD2	O00469	737 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	PLOD3	O60568	738 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	PRAMEF2	O60811	474 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	SCN2B	O60939	215 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	COQ9	O75208	318 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	ITGAM	P11215	1152 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	COX4I1	P13073	169 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	UQCRC2	P22695	453 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZFP36L2	P47974	494 aa	Known RBP	9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	FUT7	Q11130	342 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNF155	Q12901	538 aa	Predicted RBP	9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	TP53BP2	Q13625	1128 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	RAPSN	Q13702	412 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	NFYC	Q13952	458 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	TLR1	Q15399	786 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	BHLHB9	Q6PI77	547 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	C19orf48	Q6RUI8	117 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	ANGPTL8	Q6UXH0	198 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	GALNT16	Q8N428	558 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	KIF2B	Q8N4N8	673 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	POU5F2	Q8N7G0	328 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR5L2	Q8NGL0	311 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR5AK3P	Q8NH89	298 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	RP9	Q8TA86	221 aa	Known RBP	9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNF721	Q8TF20	911 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	TSPEAR	Q8WU66	669 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	APOBEC4	Q8WW27	367 aa	Known RBP	9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CTHRC1	Q96CG8	243 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CMTM5	Q96DZ9	223 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CNTNAP3B	Q96NU0	1288 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CCDC106	Q9BWC9	280 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CNTNAP3	Q9BZ76	1288 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	MYLK2	Q9H1R3	596 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CXorf36	Q9H7Y0	433 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	IL1RL2	Q9HB29	575 aa		9.45	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms