RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 CFL2Q9Y281 166 aa15.03■□□□□ -0
CIT-212ENST00000543239 TMED5Q9Y3A6 229 aa15.03■□□□□ -0
CIT-212ENST00000543239 POLR3HQ9Y535 204 aaPredicted RBP15.03■□□□□ -0
CIT-212ENST00000543239 PTGDR2Q9Y5Y4 395 aa15.03■□□□□ -0
CIT-212ENST00000543239 TMEM233B4DJY2 109 aa15.02■□□□□ -0
CIT-212ENST00000543239 UNC5CO95185 931 aa15.02■□□□□ -0
CIT-212ENST00000543239 LINC00032P0C843 101 aa15.02■□□□□ -0
CIT-212ENST00000543239 ARRB2P32121 409 aa15.02■□□□□ -0
CIT-212ENST00000543239 DUSP2Q05923 314 aa15.02■□□□□ -0
CIT-212ENST00000543239 C2orf80Q0P641 193 aa15.02■□□□□ -0
CIT-212ENST00000543239 ZNF791Q3KP31 576 aaPredicted RBP15.02■□□□□ -0
CIT-212ENST00000543239 HLA-DQA1Q5Y7H0 255 aa15.02■□□□□ -0
CIT-212ENST00000543239 LYPD8Q6UX82 237 aa15.02■□□□□ -0
CIT-212ENST00000543239 GFRALQ6UXV0 394 aa15.02■□□□□ -0
CIT-212ENST00000543239 SIAH3Q8IW03 269 aa15.02■□□□□ -0
CIT-212ENST00000543239 DDIASQ8IXT1 998 aa15.02■□□□□ -0
CIT-212ENST00000543239 TAGAPQ8N103 731 aa15.02■□□□□ -0
CIT-212ENST00000543239 ZFP62Q8NB50 900 aaPredicted RBP15.02■□□□□ -0
CIT-212ENST00000543239 OR2T11Q8NH01 316 aa15.02■□□□□ -0
CIT-212ENST00000543239 PPP1R14CQ8TAE6 165 aa15.02■□□□□ -0
CIT-212ENST00000543239 EXOSC8Q96B26 276 aaKnown RBP15.02■□□□□ -0
CIT-212ENST00000543239 SPACA9Q96E40 222 aaPredicted RBP15.02■□□□□ -0
CIT-212ENST00000543239 PKNOX2Q96KN3 472 aa15.02■□□□□ -0
CIT-212ENST00000543239 GPR137Q96N19 417 aa15.02■□□□□ -0
CIT-212ENST00000543239 CCT7Q99832 543 aa15.02■□□□□ -0
CIT-212ENST00000543239 MIEF1Q9NQG6 463 aa15.02■□□□□ -0
CIT-212ENST00000543239 SLC35C2Q9NQQ7 365 aa15.02■□□□□ -0
CIT-212ENST00000543239 TMEM114B3SHH9 223 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 PIP5K1BO14986 540 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 LSM1O15116 133 aaKnown RBP15.01□□□□□ -0.01
CIT-212ENST00000543239 SEMA7AO75326 666 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 SNUPNO95149 360 aaKnown RBP15.01□□□□□ -0.01
CIT-212ENST00000543239 SERPINE1P05121 402 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 STSP08842 583 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 FBXO45P0C2W1 286 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 GPX3P22352 226 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 MPIP34949 423 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 SOX18P35713 384 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.01□□□□□ -0.01
CIT-212ENST00000543239 ZNF628Q5EBL2 1059 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 XKR7Q5GH72 579 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 FAM180BQ6P0A1 224 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 FAM111BQ6SJ93 734 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 BNC2Q6ZN30 1099 aaPredicted RBP15.01□□□□□ -0.01
CIT-212ENST00000543239 C16orf52Q8NHV5 167 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 CDC26Q8NHZ8 85 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 AGR3Q8TD06 166 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 ADIPOR1Q96A54 375 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 ZNF764Q96H86 408 aaPredicted RBP15.01□□□□□ -0.01
CIT-212ENST00000543239 KCNK9Q9NPC2 374 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 SACM1LQ9NTJ5 587 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 DEPPQ9NTK1 212 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 OSGIN2Q9Y236 505 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 SLC5A6Q9Y289 635 aa15.01□□□□□ -0.01
CIT-212ENST00000543239 ASH1LQ9NR48 2969 aaKnown RBP15□□□□□ -0.01
CIT-212ENST00000543239 LRRK2Q5S007 2527 aa15□□□□□ -0.01
CIT-212ENST00000543239 CAPN14A8MX76 684 aa15□□□□□ -0.01
CIT-212ENST00000543239 MYO1GB0I1T2 1018 aa15□□□□□ -0.01
CIT-212ENST00000543239 BCAS2O75934 225 aaPredicted RBP15□□□□□ -0.01
CIT-212ENST00000543239 SLITRK5O94991 958 aa15□□□□□ -0.01
CIT-212ENST00000543239 CBX7O95931 251 aa15□□□□□ -0.01
CIT-212ENST00000543239 CNR1P21554 472 aa15□□□□□ -0.01
CIT-212ENST00000543239 GRK2P25098 689 aa15□□□□□ -0.01
CIT-212ENST00000543239 TMED10P49755 219 aaKnown RBP15□□□□□ -0.01
CIT-212ENST00000543239 NR0B1P51843 470 aaKnown RBP15□□□□□ -0.01
CIT-212ENST00000543239 NRG3P56975 720 aa15□□□□□ -0.01
CIT-212ENST00000543239 KCNK10P57789 538 aa15□□□□□ -0.01
CIT-212ENST00000543239 GPR85P60893 370 aa15□□□□□ -0.01
CIT-212ENST00000543239 RPL38P63173 70 aaKnown RBP15□□□□□ -0.01
CIT-212ENST00000543239 SRSF11Q05519 484 aaKnown RBP15□□□□□ -0.01
CIT-212ENST00000543239 RBPJQ06330 500 aa15□□□□□ -0.01
CIT-212ENST00000543239 MPP2Q14168 576 aa15□□□□□ -0.01
CIT-212ENST00000543239 LTB4RQ15722 352 aa15□□□□□ -0.01
CIT-212ENST00000543239 CHI3L2Q15782 390 aa15□□□□□ -0.01
CIT-212ENST00000543239 RFTN2Q52LD8 501 aaPredicted RBP15□□□□□ -0.01
CIT-212ENST00000543239 C4orf17Q53FE4 359 aa15□□□□□ -0.01
CIT-212ENST00000543239 RNFT1Q5M7Z0 435 aa15□□□□□ -0.01
CIT-212ENST00000543239 GK5Q6ZS86 529 aa15□□□□□ -0.01
CIT-212ENST00000543239 TICAM1Q8IUC6 712 aa15□□□□□ -0.01
CIT-212ENST00000543239 CCDC116Q8IYX3 515 aa15□□□□□ -0.01
CIT-212ENST00000543239 FAM9CQ8IZT9 166 aa15□□□□□ -0.01
CIT-212ENST00000543239 KIRREL3Q8IZU9 778 aa15□□□□□ -0.01
CIT-212ENST00000543239 ADCY4Q8NFM4 1077 aa15□□□□□ -0.01
CIT-212ENST00000543239 OR2M7Q8NG81 312 aa15□□□□□ -0.01
CIT-212ENST00000543239 PAQR8Q8TEZ7 354 aa15□□□□□ -0.01
CIT-212ENST00000543239 SSC4DQ8WTU2 575 aa15□□□□□ -0.01
CIT-212ENST00000543239 PPP3R2Q96LZ3 170 aa15□□□□□ -0.01
CIT-212ENST00000543239 BBS4Q96RK4 519 aa15□□□□□ -0.01
CIT-212ENST00000543239 FAM173AQ9BQD7 235 aa15□□□□□ -0.01
CIT-212ENST00000543239 SH2D2AQ9NP31 389 aa15□□□□□ -0.01
CIT-212ENST00000543239 PRODH2Q9UF12 536 aa15□□□□□ -0.01
CIT-212ENST00000543239 BCAP29Q9UHQ4 241 aa15□□□□□ -0.01
CIT-212ENST00000543239 ZDHHC2Q9UIJ5 367 aa15□□□□□ -0.01
CIT-212ENST00000543239 POLEQ07864 2286 aa15□□□□□ -0.01
CIT-212ENST00000543239 USP9XQ93008 2570 aaPredicted RBP14.99□□□□□ -0.01
CIT-212ENST00000543239 WDR91A4D1P6 747 aa14.99□□□□□ -0.01
CIT-212ENST00000543239 NPIPA5E9PKD4 350 aa14.99□□□□□ -0.01
CIT-212ENST00000543239 TFECO14948 347 aaPredicted RBP14.99□□□□□ -0.01
CIT-212ENST00000543239 ASNA1O43681 348 aa14.99□□□□□ -0.01
CIT-212ENST00000543239 HSPA4LO95757 839 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms