RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 OC90Q02509 493 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-216ENST00000543170 LTB4RQ15722 352 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 COLEC12Q5KU26 742 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 FAM180BQ6P0A1 224 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 R3HCC1LQ7Z5L2 792 aaKnown RBP17.04■□□□□ 0.32
COPS7A-216ENST00000543170 CCDC116Q8IYX3 515 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 LIX1Q8N485 282 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 TMEM156Q8N614 296 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 SLC15A4Q8N697 577 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 ZNF441Q8N8Z8 693 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 C17orf47Q8NEP4 570 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 C7orf26Q96N11 449 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 SIGLEC12Q96PQ1 595 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 BBS4Q96RK4 519 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 AKTIPQ9H8T0 292 aa17.04■□□□□ 0.32
COPS7A-216ENST00000543170 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
COPS7A-216ENST00000543170 EIF3LQ9Y262 564 aaKnown RBP17.04■□□□□ 0.32
COPS7A-216ENST00000543170 TRPC5OSA6NMA1 111 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 WWP2O00308 870 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 CBX7O95931 251 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 CD46P15529 392 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 HPCAL1P37235 193 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 FRKP42685 505 aaPredicted RBP17.03■□□□□ 0.32
COPS7A-216ENST00000543170 C21orf58P58505 322 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 INPP5JQ15735 1006 aaPredicted RBP17.03■□□□□ 0.32
COPS7A-216ENST00000543170 PRSS53Q2L4Q9 553 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 PIGGQ5H8A4 983 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 ZNF766Q5HY98 468 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 ZNF468Q5VIY5 522 aaPredicted RBP17.03■□□□□ 0.32
COPS7A-216ENST00000543170 IL23RQ5VWK5 629 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 OGFOD2Q6N063 350 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 FAM111BQ6SJ93 734 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 DND1Q8IYX4 353 aaKnown RBP17.03■□□□□ 0.32
COPS7A-216ENST00000543170 TMEM178AQ8NBL3 297 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 OR9A2Q8NGT5 310 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 PIWIL2Q8TC59 973 aaKnown RBP17.03■□□□□ 0.32
COPS7A-216ENST00000543170 SLC22A8Q8TCC7 542 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 CPT1CQ8TCG5 803 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 LRRC8CQ8TDW0 803 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 DOK4Q8TEW6 326 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 ASB15Q8WXK1 588 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 TP53INP1Q96A56 240 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 PPCDCQ96CD2 204 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 BARD1Q99728 777 aaKnown RBP17.03■□□□□ 0.32
COPS7A-216ENST00000543170 C1orf50Q9BV19 199 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 ANKRD10Q9NXR5 420 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 BAIAP2L1Q9UHR4 511 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 ATP6V1HQ9UI12 483 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 MAPRE3Q9UPY8 281 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 SHANK1Q9Y566 2161 aa17.03■□□□□ 0.32
COPS7A-216ENST00000543170 A8MVJ9 347 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 SCAMP2O15127 329 aaKnown RBP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 PDPK1O15530 556 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 ATP8B1O43520 1251 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 PLOD3O60568 738 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 SLC25A12O75746 678 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 PCSK2P16519 638 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 LBPP18428 481 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 NCBP2P52298 156 aaKnown RBP eCLIP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 MLLT10P55197 1068 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 PTGR1Q14914 329 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 SPINK14Q6IE38 97 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 OPN5Q6U736 354 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 ZNF227Q86WZ6 799 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 CYP4Z2PQ8N1L4 340 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 NATD1Q8N6N6 113 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 ADCY4Q8NFM4 1077 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 CLHC1Q8NHS4 586 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 C16orf52Q8NHV5 167 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 ZFP28Q8NHY6 868 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 DYDC1Q8WWB3 177 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 GFM2Q969S9 779 aaKnown RBP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 MIB2Q96AX9 1013 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 SNRNP40Q96DI7 357 aaKnown RBP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 MAELQ96JY0 434 aaKnown RBP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 C5orf34Q96MH7 638 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 AMDHD1Q96NU7 426 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 GAL3ST4Q96RP7 486 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 LIN28AQ9H9Z2 209 aaKnown RBP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 HPF1Q9NWY4 346 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 MARCOQ9UEW3 520 aaPredicted RBP17.02■□□□□ 0.32
COPS7A-216ENST00000543170 PRODH2Q9UF12 536 aa17.02■□□□□ 0.32
COPS7A-216ENST00000543170 A0A087WV62 115 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 C2orf92A0A1B0GVN3 265 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 PLOD2O00469 737 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 SDHDO14521 159 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 NME2P1O60361 137 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 LRATO95237 230 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 NADKO95544 446 aaPredicted RBP17.01■□□□□ 0.31
COPS7A-216ENST00000543170 SP1P08047 785 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 G6PDP11413 515 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 PRPS1L1P21108 318 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 GPX3P22352 226 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 NME2P22392 152 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 SOX3P41225 446 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 MRPS35P82673 323 aaKnown RBP17.01■□□□□ 0.31
COPS7A-216ENST00000543170 DUSP8Q13202 625 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 TRMT12Q53H54 448 aaKnown RBP17.01■□□□□ 0.31
COPS7A-216ENST00000543170 ZNF385BQ569K4 471 aa17.01■□□□□ 0.31
COPS7A-216ENST00000543170 SLC25A25Q6KCM7 469 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms