RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 CATSPEREQ5SY80 951 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 MLIPQ5VWP3 458 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 FAM43BQ6ZT52 329 aaPredicted RBP12.52□□□□□ -0.41
TNC-212ENST00000542877 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 CHDHQ8NE62 594 aaPredicted RBP12.52□□□□□ -0.41
TNC-212ENST00000542877 HDHD5Q9BXW7 423 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 SMG9Q9H0W8 520 aaKnown RBP12.52□□□□□ -0.41
TNC-212ENST00000542877 MYH8P13535 1937 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 A0A1W2PPK0 400 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 HYKKA2RU49 373 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 MITFO75030 526 aaPredicted RBP12.52□□□□□ -0.41
TNC-212ENST00000542877 IFNA2P01563 188 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 MECP2P51608 486 aaKnown RBP12.52□□□□□ -0.41
TNC-212ENST00000542877 CAPZA1P52907 286 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 LRIT3Q3SXY7 679 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 TMEM107Q6UX40 140 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 TSPAN33Q86UF1 283 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 OR5M3Q8NGP4 307 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 OR10T2Q8NGX3 314 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 NETO1Q8TDF5 533 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 FKBP10Q96AY3 582 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 PGAP3Q96FM1 320 aaPredicted RBP12.52□□□□□ -0.41
TNC-212ENST00000542877 CLEC4EQ9ULY5 219 aa12.52□□□□□ -0.41
TNC-212ENST00000542877 IGKV6-21A0A0C4DH24 114 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 PHYHO14832 338 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 PRKCAP17252 672 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 DCTP40126 519 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 STK19P49842 368 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 ART1P52961 327 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 RPS21P63220 83 aaKnown RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 OR4C11Q6IEV9 310 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 P4HA3Q7Z4N8 544 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ZNF440Q8IYI8 595 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 BEST3Q8N1M1 668 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ZSCAN4Q8NAM6 433 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 PROKR1Q8TCW9 393 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TMEM19Q96HH6 336 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 C11orf98E9PRG8 122 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 HCRTR2O43614 444 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TOXO94900 526 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 RAB3BP20337 219 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 CNR2P34972 360 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 RPS15AP62244 130 aaKnown RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 PLGLB1Q02325 96 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 CDK5R2Q13319 367 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 MICAQ29983 383 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 CLECL1Q8IZS7 167 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 FRS2Q8WU20 508 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ECHDC3Q96DC8 303 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 SLC6A7Q99884 636 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 C11orf49Q9H6J7 331 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 GPR89AB7ZAQ6 455 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 M0R129 80 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 BCAS1O75363 584 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 STC2O76061 302 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 SFTPBP07988 381 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 GPR89BP0CG08 455 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TYRP1P17643 537 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TAS2R38P59533 333 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ZNF648Q5T619 568 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 ZNF709Q8N972 641 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 OR4K5Q8NGD3 323 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 FBXO27Q8NI29 283 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 GSTO2Q9H4Y5 243 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 NANSQ9NR45 359 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 NLKQ9UBE8 527 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 MEN1O00255 615 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 RAD51DO75771 328 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 HTR2BP41595 481 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 HTR6P50406 440 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 RPS26P62854 115 aaKnown RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 CRYZQ08257 329 aaKnown RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 SPRED3Q2MJR0 410 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 CDNFQ49AH0 187 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TMEM164Q5U3C3 297 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 KIF18BQ86Y91 864 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 GALNT11Q8NCW6 608 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 LMX1AQ8TE12 382 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 MMABQ96EY8 250 aaPredicted RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 SLC12A9Q9BXP2 914 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 PPIL3Q9H2H8 161 aaKnown RBP12.51□□□□□ -0.41
TNC-212ENST00000542877 ASB4Q9Y574 426 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 ZNF860A6NHJ4 632 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 CENPBD1B2RD01 187 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 LAMP1P11279 417 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 SUOXP51687 545 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 CCDC58Q4VC31 144 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 PDZD9Q8IXQ8 264 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 VWA5B2Q8N398 1253 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 GPR150Q8NGU9 434 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 C16orf78Q8WTQ4 265 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 DKKL1Q9UK85 242 aa12.51□□□□□ -0.41
TNC-212ENST00000542877 NOX1Q9Y5S8 564 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms