RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 GOT2P00505 430 aaKnown RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 SFTPBP07988 381 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 CT45A8P0DMV1 189 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 CT45A9P0DMV2 189 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 P4HA1P13674 534 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 MGMTP16455 207 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 CYP3A5P20815 502 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 UCP1P25874 307 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 ARHGDIAP52565 204 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 MFAP2P55001 183 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 KIAA1024LP59773 190 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 NDPQ00604 133 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 GFPT1Q06210 699 aaPredicted RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 TEFQ10587 303 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 BTG3Q14201 252 aaPredicted RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 C17orf58Q2M2W7 97 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 EPC2Q52LR7 807 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 CCDC184Q52MB2 194 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 GPAT3Q53EU6 434 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 CT45A2Q5DJT8 189 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 CMPK2Q5EBM0 449 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 C1orf189Q5VU69 101 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 ASRGL1Q7L266 308 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 PRSS48Q7RTY5 328 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 SFRP1Q8N474 314 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 SIDT2Q8NBJ9 832 aaKnown RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 FLVCR1-AS1Q8TAF5 88 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 SNX21Q969T3 373 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 NTNG2Q96CW9 530 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 C5orf30Q96GV9 206 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 PPP1R16AQ96I34 528 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 RANBP9Q96S59 729 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 JPH2Q9BR39 696 aaPredicted RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 MRPL9Q9BYD2 267 aaKnown RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 ZBP1Q9H171 429 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 C2orf40Q9H1Z8 148 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 Q9HAA7 133 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 ARGLU1Q9NWB6 273 aaPredicted RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 MAD2L2Q9UI95 211 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 DIMT1Q9UNQ2 313 aaKnown RBP1.73□□□□□ -2.13
KNTC1-213ENST00000542727 RAD54L2Q9Y4B4 1467 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
KNTC1-213ENST00000542727 A0A1W2PQ72 361 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FAM170AA1A519 330 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FAM168BA1KXE4 195 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 EFCAB7A8K855 629 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 SLC28A1O00337 649 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 EI24O14681 340 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 TSPAN2O60636 221 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NUDT14O95848 222 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 OAS1P00973 400 aaKnown RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FCER2P06734 321 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 SLC35E2P0CK97 266 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 PGAM2P15259 253 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 ATP6V1B1P15313 513 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 IDSP22304 550 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 CHRNA3P32297 505 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 MAGEA9P43362 315 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NSFP46459 744 aaKnown RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 PITPNBP48739 271 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FNTAP49354 379 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 CDKL1Q00532 357 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 HSPA14Q0VDF9 509 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NPRL3Q12980 569 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 KLF5Q13887 457 aaPredicted RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 CARTPTQ16568 116 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 CLPPQ16740 277 aaPredicted RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 PPP1R3AQ16821 1122 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 HKDC1Q2TB90 917 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 C1QTNF12Q5T7M4 302 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 KHDRBS2Q5VWX1 349 aaKnown RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 DMKNQ6E0U4 476 aaPredicted RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 CDC42EP5Q6NZY7 148 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 BNIPLQ7Z465 357 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 TICAM2Q86XR7 235 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 ARL14Q8N4G2 192 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NEK11Q8NG66 645 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 OR52J3Q8NH60 311 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 PSMA8Q8TAA3 256 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 KRT35Q92764 455 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 PTP4A1Q93096 173 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 BIRC7Q96CA5 298 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 ZNF560Q96MR9 790 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 SPATA13Q96N96 652 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 ZIM3Q96PE6 472 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 SPAG8Q99932 426 aaPredicted RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FAM213AQ9BRX8 229 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 TTYH2Q9BSA4 534 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NRN1Q9NPD7 142 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 TIGARQ9NQ88 270 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 PNPLA3Q9NST1 481 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 ACOXLQ9NUZ1 547 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 DNAJC11Q9NVH1 559 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 VPS54Q9P1Q0 977 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 COPS7AQ9UBW8 275 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NOL7Q9UMY1 257 aaKnown RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FOXA2Q9Y261 457 aaPredicted RBP1.72□□□□□ -2.13
KNTC1-213ENST00000542727 NTNG1Q9Y2I2 539 aa1.72□□□□□ -2.13
KNTC1-213ENST00000542727 FAM205AQ6ZU69 1335 aa1.71□□□□□ -2.14
KNTC1-213ENST00000542727 A0A0J9YVX5 310 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms