RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 IFI6P09912 130 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 EFNA1P20827 205 aaPredicted RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 S1PR1P21453 382 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 GPC1P35052 558 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 CLCN2P51788 898 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 MRPS35P82673 323 aaKnown RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 UBAP2LQ14157 1087 aaKnown RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 TRMT12Q53H54 448 aaKnown RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 MSANTD1Q6ZTZ1 278 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 MTDHQ86UE4 582 aaKnown RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 OR7G1Q8NGA0 311 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 KAT2AQ92830 837 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.94■□□□□ 0.14
LIG1-204ENST00000542460 ITPR1Q14643 2758 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 PCSK5Q92824 1860 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 A0A087WV62 115 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 CCDC154A6NI56 674 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 FCHO1O14526 889 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 SLC22A2O15244 555 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 CFLARO15519 480 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 PLOD3O60568 738 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 BCAS2O75934 225 aaPredicted RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 C6orf47O95873 294 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 ITGA3P26006 1051 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 SOX18P35713 384 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 CHAF1BQ13112 559 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 KLF10Q13118 480 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 TIGD2Q4W5G0 525 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 JMJD6Q6NYC1 403 aaPredicted RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 BORAQ6PGQ7 559 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 TMEM107Q6UX40 140 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 GALNT16Q8N428 558 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 AMER2Q8N7J2 671 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 ZNF321PQ8N8H1 164 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 ANKS4BQ8N8V4 417 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 OR7G2Q8NG99 324 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 PSMA8Q8TAA3 256 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 BCAS4Q8TDM0 211 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 TSPEARQ8WU66 669 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 VPS33AQ96AX1 596 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 SPDL1Q96EA4 605 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 ELP4Q96EB1 424 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 THOC3Q96J01 351 aaKnown RBP15.94■□□□□ 0.14
LIG1-204ENST00000542460 NUDT9Q9BW91 350 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 OR10A5Q9H207 317 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 RMND5AQ9H871 391 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 NEUROD4Q9HD90 331 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 TAS2R9Q9NYW1 312 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 PTGFRNQ9P2B2 879 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 BTNL2Q9UIR0 455 aa15.94■□□□□ 0.14
LIG1-204ENST00000542460 NR5A2O00482 541 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 NDUFAB1O14561 156 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 ITGB2P05107 769 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 CELA2AP08217 269 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 SSTR4P31391 388 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 MC3RP41968 323 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 SLC37A1P57057 533 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 HBA1P69905 142 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 IRAK1BP1Q5VVH5 260 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 HSDL2Q6YN16 418 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 RNF111Q6ZNA4 994 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 ANKRD46Q86W74 232 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 CLECL1Q8IZS7 167 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 CCDC197Q8NCU1 140 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 OR8K3Q8NH51 312 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 CCDC115Q96NT0 180 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 LHPPQ9H008 270 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 PRORYQ9H606 182 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 C3orf14Q9HBI5 128 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 SLC52A3Q9NQ40 469 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 DDX18Q9NVP1 670 aaKnown RBP15.93■□□□□ 0.14
LIG1-204ENST00000542460 C19orf53Q9UNZ5 99 aaPredicted RBP15.93■□□□□ 0.14
LIG1-204ENST00000542460 CAPN7Q9Y6W3 813 aa15.93■□□□□ 0.14
LIG1-204ENST00000542460 TRBV11-1A0A0K0K1C0 115 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 OR6C76A6NM76 312 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 CBX7O95931 251 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 CLPSP04118 112 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 ABCB1P08183 1280 aaPredicted RBP15.92■□□□□ 0.14
LIG1-204ENST00000542460 ITGAMP11215 1152 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 CDK9P50750 372 aaKnown RBP15.92■□□□□ 0.14
LIG1-204ENST00000542460 CCL11P51671 97 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 EXOSC7Q15024 291 aaKnown RBP15.92■□□□□ 0.14
LIG1-204ENST00000542460 MAPKAPK3Q16644 382 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 COL28A1Q2UY09 1125 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 VPS26BQ4G0F5 336 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 FHL5Q5TD97 284 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 GK5Q6ZS86 529 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 GPR155Q7Z3F1 870 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 OR2L13Q8N349 312 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 KIF2BQ8N4N8 673 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 ZNF615Q8N8J6 731 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 OR4A15Q8NGL6 344 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 DEFB126Q9BYW3 111 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 MYLK2Q9H1R3 596 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 SIRT3Q9NTG7 399 aaPredicted RBP15.92■□□□□ 0.14
LIG1-204ENST00000542460 ARMCX1Q9P291 453 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 BCAP29Q9UHQ4 241 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 ZNF223Q9UK11 482 aaPredicted RBP15.92■□□□□ 0.14
LIG1-204ENST00000542460 CFL2Q9Y281 166 aa15.92■□□□□ 0.14
LIG1-204ENST00000542460 ZFYVE26Q68DK2 2539 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms