RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 PIK3R3Q92569 461 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 SMARCD2Q92925 531 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 NKD1Q969G9 470 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 UHRF1Q96T88 793 aaPredicted RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 MND1Q9BWT6 205 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 MMP28Q9H239 520 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 MGAT4BQ9UQ53 548 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 CEP250Q9BV73 2442 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 A0A1W2PRG6 482 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 SOX2P48431 317 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 PRMT2P55345 433 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 TUBA1BP68363 451 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 ZNF267Q14586 743 aaPredicted RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 ZNF385BQ569K4 471 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 TUBA1AQ71U36 451 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 OR8H1Q8NGG4 311 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 IL21Q9HBE4 155 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 LDB3O75112 727 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 CD160O95971 181 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 NPPBP16860 134 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 IDUAP35475 653 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 RUNX3Q13761 415 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 FBXO43Q4G163 708 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 MPP7Q5T2T1 576 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 ZNF776Q68DI1 518 aaPredicted RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 DESI1Q6ICB0 168 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 OR4C11Q6IEV9 310 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 OR8J1Q8NGP2 316 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 TMCO6Q96DC7 493 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 PNO1Q9NRX1 252 aaKnown RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 WBP4O75554 376 aaKnown RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 VNN2O95498 520 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 KLF8O95600 359 aaPredicted RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 IFNGP01579 166 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 CPXM2Q8N436 756 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 OR52P1PQ8NH57 321 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 NEIL3Q8TAT5 605 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 SLC38A5Q8WUX1 472 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 MBOAT4Q96T53 435 aa15.28■□□□□ 0.04
VARS2-212ENST00000542001 MRPL15Q9P015 296 aaKnown RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 MRPS33Q9Y291 106 aaKnown RBP15.28■□□□□ 0.04
VARS2-212ENST00000542001 GNRH1P01148 92 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 TFPIP10646 304 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 GNSP15586 552 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 ITIH1P19827 911 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 CHMP24386 653 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 PYCR1P32322 319 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 GGT2P36268 569 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 PIK3CBP42338 1070 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 PPP5CP53041 499 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 VEZF1Q14119 521 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 TBRG1Q3YBR2 411 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 PLBD1Q6P4A8 553 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 ENTHD1Q8IYW4 607 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 FRMD1Q8N878 549 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.04
VARS2-212ENST00000542001 SLITRK2Q9H156 845 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 RETREG1Q9H6L5 497 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 IL37Q9NZH6 218 aa15.27■□□□□ 0.04
VARS2-212ENST00000542001 USP36Q9P275 1121 aaKnown RBP15.27■□□□□ 0.04
VARS2-212ENST00000542001 PRRT4C9JH25 899 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 PLD2O14939 933 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 SLC25A12O75746 678 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 NDUFAF6Q330K2 333 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 PLEKHG7Q6ZR37 379 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 KLHL36Q8N4N3 616 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 OR52E4Q8NGH9 312 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 CD180Q99467 661 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 SLC38A3Q99624 504 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 CPEB1Q9BZB8 566 aaKnown RBP15.27■□□□□ 0.03
VARS2-212ENST00000542001 EGLN3Q9H6Z9 239 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 NDUFAF4Q9P032 175 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 CLEC2DQ9UHP7 191 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 PCGF2P35227 344 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 GABARAPL2P60520 117 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 MSRB3Q8IXL7 192 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 RBM12BQ8IXT5 1001 aaKnown RBP15.27■□□□□ 0.03
VARS2-212ENST00000542001 TIGD4Q8IY51 512 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 TREX2Q9BQ50 279 aaPredicted RBP15.27■□□□□ 0.03
VARS2-212ENST00000542001 VN1R3Q9BXE9 311 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 SPNS1Q9H2V7 528 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 CLEC4MQ9H2X3 399 aaPredicted RBP15.27■□□□□ 0.03
VARS2-212ENST00000542001 NECTIN3Q9NQS3 549 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 MAN2B2Q9Y2E5 1009 aa15.27■□□□□ 0.03
VARS2-212ENST00000542001 RNGTTO60942 597 aaKnown RBP15.26■□□□□ 0.03
VARS2-212ENST00000542001 ACSL1P33121 698 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 CD97P48960 835 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 RAB28P51157 221 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 LRRC26Q2I0M4 334 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 FAM220AQ7Z4H9 259 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 VRK2Q86Y07 508 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 ING3Q9NXR8 418 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 PPIEQ9UNP9 301 aaKnown RBP15.26■□□□□ 0.03
VARS2-212ENST00000542001 SLITRK5O94991 958 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 RCVRNP35243 200 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 PRLHRP49683 370 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 DCDC1P59894 354 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 SNRPD2P62316 118 aaKnown RBP15.26■□□□□ 0.03
VARS2-212ENST00000542001 TRAM2Q15035 370 aa15.26■□□□□ 0.03
VARS2-212ENST00000542001 DGLUCYQ7Z3D6 616 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms