RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CNPY4Q8N129 248 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZBTB2Q8N680 514 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 OR2L8Q8NGY9 312 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZCCHC10Q8TBK6 192 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 LPGAT1Q92604 370 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 INPP5DQ92835 1189 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZUFSPQ96AP4 578 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 APOPT1Q96IL0 206 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SLC45A3Q96JT2 553 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ADAD1Q96M93 576 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 LRFN5Q96NI6 719 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 BIRC8Q96P09 236 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 KRT12Q99456 494 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 C17orf62Q9BQA9 187 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 HDHD5Q9BXW7 423 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 PITPNM3Q9BZ71 974 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SPRY4Q9C004 299 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CHRNA10Q9GZZ6 450 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 RAB17Q9H0T7 212 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CXorf56Q9H5V9 222 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 XKR8Q9H6D3 395 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 IARS2Q9NSE4 1012 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF446Q9NWS9 450 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 UTP6Q9NYH9 597 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 SPATA7Q9P0W8 599 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 FBXO5Q9UKT4 447 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ICKQ9UPZ9 632 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 DHDHQ9UQ10 334 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 UTP11Q9Y3A2 253 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 AP1M2Q9Y6Q5 423 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 CACNA1BQ00975 2339 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 TPRP12270 2363 aaKnown RBP5.11□□□□□ -1.59
CPSF7-220ENST00000541963 ACACBO00763 2458 aa5.11□□□□□ -1.59
CPSF7-220ENST00000541963 LOC101059948A0A1B0GTJ6 334 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 NPIPB13A6NJU9 1138 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 NPIPB5A8MRT5 1133 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 C21orf140B9A014 251 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TMEM150CB9EJG8 249 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 NPIPB4C9JG80 1138 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TTI1O43156 1089 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 NIPSNAP2O75323 286 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PROP1O75360 226 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 SEC31AO94979 1220 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CCNDBP1O95273 360 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 C1orf105O95561 183 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 HIST1H2AGP0C0S8 130 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ERVK-10P10266 1014 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 LIFP15018 202 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ST6GAL1P15907 406 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 UGT2B7P16662 529 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TCN2P20062 427 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 HIST1H2ADP20671 130 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CMPK1P30085 196 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PKLRP30613 574 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ELK3P41970 407 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CCR10P46092 362 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 MVDP53602 400 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ARSFP54793 590 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CASP6P55212 293 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PPP1CAP62136 330 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PDIA2Q13087 525 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CRYMQ14894 314 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ARHGAP19Q14CB8 494 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ZKSCAN8Q15776 578 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 KLHL38Q2WGJ6 581 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 SOWAHCQ53LP3 525 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 AWAT1Q58HT5 328 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CTSL3PQ5NE16 218 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 KIAA1614Q5VZ46 1190 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PWWP2BQ6NUJ5 590 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 MTFR2Q6P444 385 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CNSTQ6PJW8 725 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TIPARPQ7Z3E1 657 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 YTHDF3Q7Z739 585 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 KLBQ86Z14 1044 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 APLFQ8IW19 511 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 DENND6AQ8IWF6 608 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 C17orf53Q8N3J3 647 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 SPATA4Q8NEY3 305 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 TNIP2Q8NFZ5 429 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 OR9A1PQ8NGU1 263 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 RFWD2Q8NHY2 731 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 HMGCLL1Q8TB92 370 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 LKAAEAR1Q8TD35 194 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 MCOLN3Q8TDD5 553 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 PYROXD1Q8WU10 500 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CDKL2Q92772 493 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 MR1Q95460 341 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ZNF501Q96CX3 271 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 RNFT2Q96EX2 444 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CERS2Q96G23 380 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 RITA1Q96K30 269 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 FAM210AQ96ND0 272 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 OR2A14Q96R47 310 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ERP44Q9BS26 406 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 H2AFJQ9BTM1 129 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CADM1Q9BY67 442 aaKnown RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 CTDSP1Q9GZU7 261 aa5.1□□□□□ -1.59
CPSF7-220ENST00000541963 ACTR5Q9H9F9 607 aaPredicted RBP5.1□□□□□ -1.59
CPSF7-220ENST00000541963 LHX9Q9NQ69 397 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms