RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 NRARPQ7Z6K4 114 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 PHACTR4Q8IZ21 702 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 TAGAPQ8N103 731 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 LGI4Q8N135 537 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FAM109AQ8N4B1 249 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FAM83FQ8NEG4 500 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 WDR36Q8NI36 951 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 SPPL2AQ8TCT8 520 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SLC25A46Q96AG3 418 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SIPA1Q96FS4 1042 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 TPD52L3Q96J77 140 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 RPL10LQ96L21 214 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 KCTD7Q96MP8 289 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FEVQ99581 238 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 C2orf49Q9BVC5 232 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 ACPTQ9BZG2 426 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 SRRQ9GZT4 340 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 IKZF5Q9H5V7 419 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 NDUFB11Q9NX14 153 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 MS4A12Q9NXJ0 267 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 PAQR5Q9NXK6 330 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 WSB2Q9NYS7 404 aaPredicted RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 CRLS1Q9UJA2 301 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FZD4Q9ULV1 537 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 FNDC3AQ9Y2H6 1198 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 SPO11Q9Y5K1 396 aa9.88□□□□□ -0.83
CHFR-219ENST00000541341 GOLGA4Q13439 2230 aaKnown RBP9.88□□□□□ -0.83
CHFR-219ENST00000541341 MGAT4DA6NG13 374 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ZAR1LA6NP61 321 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 UPK3BL1B0FP48 263 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 UPK3BL2E5RIL1 263 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 BET1O15155 118 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 BCAT2O15382 392 aaPredicted RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 GADD45GO95257 159 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 CD160O95971 181 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 PDYNP01213 254 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 IFNW1P05000 195 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 STSP08842 583 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 HSMCR30P0CW71 290 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ACADMP11310 421 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 MYL12AP19105 171 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 GSTM3P21266 225 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ACRV1P26436 265 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 IFNA8P32881 189 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ACVRL1P37023 503 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 SPAM1P38567 509 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 GZMKP49863 264 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 CLDN6P56747 220 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ARF5P84085 180 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 SPIBQ01892 262 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 BAMBIQ13145 260 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ILKQ13418 452 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ENPP2Q13822 863 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 EFR3AQ14156 821 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 RGNQ15493 299 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 TSTQ16762 297 aaKnown RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 HLA-BQ31612 363 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 RETSATQ6NUM9 610 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 SERPINA13PQ6UXR4 307 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 DNAJC14Q6Y2X3 702 aaPredicted RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 GPR155Q7Z3F1 870 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 RABEPKQ7Z6M1 372 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 SERPINA9Q86WD7 417 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 GATAD2AQ86YP4 633 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 KLHDC8AQ8IYD2 350 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 APCDD1Q8J025 514 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 CYP4Z2PQ8N1L4 340 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 B3GNT7Q8NFL0 401 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 OR7D4Q8NG98 312 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 OR52N2Q8NGI0 321 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 RHBDD1Q8TEB9 315 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 UTP15Q8TED0 518 aaKnown RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 CREB3L1Q96BA8 519 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 COQ8BQ96D53 544 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 LRIG1Q96JA1 1093 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 SPON2Q9BUD6 331 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 MTG2Q9H4K7 406 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 CCDC86Q9H6F5 360 aaKnown RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 C6orf106Q9H6K1 298 aaPredicted RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 ASB8Q9H765 288 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 C12orf10Q9HB07 376 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ZFYVE1Q9HBF4 777 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 FZD3Q9NPG1 666 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 ITM2CQ9NQX7 267 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 TM7SF3Q9NS93 570 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 EXD2Q9NVH0 621 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 RBFOX1Q9NWB1 397 aaKnown RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 TOR4AQ9NXH8 423 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 GPRC5BQ9NZH0 403 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 EMC3Q9P0I2 261 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 COPZ2Q9P299 210 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 THAP10Q9P2Z0 257 aaPredicted RBP9.87□□□□□ -0.83
CHFR-219ENST00000541341 SUSD2Q9UGT4 822 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 PCOLCE2Q9UKZ9 415 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 HS3ST2Q9Y278 367 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 RAXQ9Y2V3 346 aa9.87□□□□□ -0.83
CHFR-219ENST00000541341 GLYATL1P3A0A0U1RQE8 302 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 H0YIV9 168 aa9.86□□□□□ -0.83
CHFR-219ENST00000541341 FAAHO00519 579 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms