RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 J3KR12 359 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PRRG1O14668 218 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RP2O75695 350 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TCRBP04435 133 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ZDHHC11BP0C7U3 371 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CBSLP0DN79 551 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 UROSP10746 265 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CBSP35520 551 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 MRPL19P49406 292 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ZP1P60852 638 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 HLXQ14774 488 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 EIF2S3LQ2VIR3 472 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CRTC2Q53ET0 693 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RNASE12Q5GAN4 147 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 NOMO2Q5JPE7 1267 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 C3orf38Q5JPI3 329 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 SPANXN4Q5MJ08 99 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ELP2Q6IA86 826 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ZCCHC12Q6PEW1 402 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ZNF613Q6PF04 617 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PAQR6Q6TCH4 344 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PTCHD4Q6ZW05 846 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PUSL1Q8N0Z8 303 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 EIF4E3Q8N5X7 224 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 SLC5A8Q8N695 610 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RELL2Q8NC24 303 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CAMKVQ8NCB2 501 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TMEM163Q8TC26 289 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ADAMTS19Q8TE59 1207 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TM9SF4Q92544 642 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TBC1D20Q96BZ9 403 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 HSH2DQ96JZ2 352 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RHOVQ96L33 236 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 LURAP1Q96LR2 239 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 IL4I1Q96RQ9 567 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 VRK1Q99986 396 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 SOSTQ9BQB4 213 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 FICDQ9BVA6 458 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RNF39Q9H2S5 420 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 C11orf49Q9H6J7 331 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CLN6Q9NWW5 311 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 NKIRAS2Q9NYR9 191 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CFAP97Q9P2B7 532 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 DHCR7Q9UBM7 475 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 FAM220BPB1ANY3 271 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 M0QZ92 97 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 KPNA3O00505 521 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CCL22O00626 93 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CASC3O15234 703 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TFP02787 698 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PFKMP08237 780 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 MTHFD2P13995 350 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CD1DP15813 335 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 GIFP27352 417 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CHRNA4P43681 627 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 AFF1P51825 1210 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 NR0B1P51843 470 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ACTR1AP61163 376 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 GPNMBQ14956 572 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TCTN1Q2MV58 587 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 CCDC157Q569K6 752 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 FAM109BQ6ICB4 259 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PDE12Q6L8Q7 609 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 LCLAT1Q6UWP7 414 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 Q6ZSR9 355 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 SERPINA12Q8IW75 414 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 MDGA1Q8NFP4 955 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RFT1Q96AA3 541 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 FCRL1Q96LA6 429 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 C19orf43Q9BQ61 176 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 THAP7Q9BT49 309 aaPredicted RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 NXF3Q9H4D5 531 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 TFB2MQ9H5Q4 396 aaKnown RBP9.24□□□□□ -0.93
CLDN2-202ENST00000540876 ENAMQ9NRM1 1142 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 RLIMQ9NVW2 624 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 GALPQ9UBC7 116 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PADI3Q9ULW8 664 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 PRUNE2Q8WUY3 3088 aa9.24□□□□□ -0.93
CLDN2-202ENST00000540876 LOC285095A0A1B0GVY8 99 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 EEF1E1O43324 174 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 IL1RNP18510 177 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 NFYAP23511 347 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 EIF2S3P41091 472 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 STK19P49842 368 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 AGTR2P50052 363 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 RABGGTBP53611 331 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 CRYBB1P53674 252 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 BPIFB3P59826 476 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 ACY1Q03154 408 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SPIN4Q56A73 249 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 GCNT6Q5T4J0 391 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 METAP1DQ6UB28 335 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 IL27RAQ6UWB1 636 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 LRRN1Q6UXK5 716 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 RHOUQ7L0Q8 258 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TMCO2Q7Z6W1 182 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 ATPAF2Q8N5M1 289 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 THAP6Q8TBB0 222 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 RXFP4Q8TDU9 374 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms