RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PIH1D1Q9NWS0 290 aaKnown RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 TMEM160Q9NX00 188 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF226Q9NYT6 803 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 MARCH4Q9P2E8 410 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-214ENST00000540865 LPAR3Q9UBY5 353 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 CAPN11Q9UMQ6 739 aa4.2□□□□□ -1.74
SNHG1-214ENST00000540865 TENM1Q9UKZ4 2725 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 URADA6NGE7 173 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 LRRC3CA6NJW4 275 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 A8MXE2 369 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 GFYI3L273 518 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 CD3EAPO15446 510 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 NDUFS4O43181 175 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 KCNAB3O43448 404 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ZBTB14O43829 449 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 RCBTB2O95199 551 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 METTL18O95568 372 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 SYF2O95926 243 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 KNG1P01042 644 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 C1QAP02745 245 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 LOXP28300 417 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 IMPA1P29218 277 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 IDUAP35475 653 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 PIGAP37287 484 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 TRPC1P48995 793 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 NR1H2P55055 460 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 HSD17B7P56937 341 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 KCNJ2P63252 427 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 RGS1Q08116 209 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 FOXF2Q12947 444 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 DUSP8Q13202 625 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 GAB1Q13480 694 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 BMPR2Q13873 1038 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 KCNJ11Q14654 390 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ELAVL1Q15717 326 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 MPEG1Q2M385 716 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ASTE1Q2TB18 679 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF791Q3KP31 576 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 PIGGQ5H8A4 983 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 NHSL2Q5HYW2 709 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 CTSL3PQ5NE16 218 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 SLC22A10Q63ZE4 541 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 BHLHB9Q6PI77 547 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 SASS6Q6UVJ0 657 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 LUZP2Q86TE4 346 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 LDB1Q86U70 411 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 CAND1Q86VP6 1230 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 C17orf64Q86WR6 236 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 REXO1L1PQ8IX06 675 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 CA13Q8N1Q1 262 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 TBC1D19Q8N5T2 526 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 GPATCH11Q8N954 259 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 C9orf106Q8NAJ2 232 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 MORN4Q8NDC4 146 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 OR52K1Q8NGK4 314 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 NT5CQ8TCD5 201 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ZPLD1Q8TCW7 415 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 UTP15Q8TED0 518 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 DAZLQ92904 295 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ZBED6CLQ96FA7 236 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 WDYHV1Q96HA8 205 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 MARK4Q96L34 752 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF778Q96MU6 729 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 NAP1L5Q96NT1 182 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 WFIKKN1Q96NZ8 548 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 BIRC8Q96P09 236 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 TRIB1Q96RU8 372 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 BEX2Q9BXY8 128 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ANGPTL4Q9BY76 406 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 PLA2G12AQ9BZM1 189 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 RHBGQ9H310 441 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 ADAP2Q9NPF8 381 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 PNO1Q9NRX1 252 aaKnown RBP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 PSD3Q9NYI0 1048 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 CNIH4Q9P003 139 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 KLHL42Q9P2K6 505 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 MAGEL2Q9UJ55 1249 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.19□□□□□ -1.74
SNHG1-214ENST00000540865 TCAF1Q9Y4C2 921 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 HYOU1Q9Y4L1 999 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 IKBKGQ9Y6K9 419 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 CLCA3PQ9Y6N3 262 aa4.19□□□□□ -1.74
SNHG1-214ENST00000540865 TRBC2A0A5B9 178 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 MACROD2A1Z1Q3 448 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 ERI2A8K979 691 aaKnown RBP4.18□□□□□ -1.74
SNHG1-214ENST00000540865 SMTNL1A8MU46 457 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 PFDN6O15212 129 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 PJA2O43164 708 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 OR1F1O43749 312 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF354AO60765 605 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-214ENST00000540865 NIPSNAP2O75323 286 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 APOL3O95236 402 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 HPNP05981 417 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF888P0CJ79 500 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-214ENST00000540865 MPC1LP0DKB6 136 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 SMIM10L1P0DMW3 83 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 CDH1P12830 882 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 CYP4B1P13584 511 aa4.18□□□□□ -1.74
SNHG1-214ENST00000540865 ENO3P13929 434 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-214ENST00000540865 CCND1P24385 295 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms