RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 ADAP00813 363 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 FHP07954 510 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 ZNF182P17025 639 aaPredicted RBP12.98□□□□□ -0.33
RTN3-210ENST00000540798 CSNK2A2P19784 350 aaPredicted RBP12.98□□□□□ -0.33
RTN3-210ENST00000540798 SNRPNP63162 240 aaKnown RBP12.98□□□□□ -0.33
RTN3-210ENST00000540798 RELAQ04206 551 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 TGM3Q08188 693 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 PRRT3Q5FWE3 981 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 FCRL6Q6DN72 434 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 AQP11Q8NBQ7 271 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 COL21A1Q96P44 957 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 PRDM9Q9NQV7 894 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 NTMQ9P121 344 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 RHCGQ9UBD6 479 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 REV1Q9UBZ9 1251 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 A0A1W2PS29 197 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 CHRM4P08173 479 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 UGT2B7P16662 529 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 ANXA11P50995 505 aaKnown RBP12.98□□□□□ -0.33
RTN3-210ENST00000540798 RD3Q7Z3Z2 195 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 LACC1Q8IV20 430 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 SLC44A2Q8IWA5 706 aaPredicted RBP12.98□□□□□ -0.33
RTN3-210ENST00000540798 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 KCT2Q8NC54 265 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 KCNK12Q9HB15 430 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 GPR27Q9NS67 375 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 SEC14L3Q9UDX4 400 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 NDOR1Q9UHB4 597 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 A4GNTQ9UNA3 340 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 ENTPD4Q9Y227 616 aa12.98□□□□□ -0.33
RTN3-210ENST00000540798 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 ASNA1O43681 348 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 NARSO43776 548 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 RASGRP1O95267 797 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 HMGN2P05204 90 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 IGHV4-34P06331 123 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 MAPK10P53779 464 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 CRISP3P54108 245 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 SPCS2Q15005 226 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 SEC23BQ15437 767 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 TMEM31Q5JXX7 168 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 RBM45Q8IUH3 476 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 SLC22A18ASQ8N1D0 253 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 GIMAP5Q96F15 307 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 KCMF1Q9P0J7 381 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 FAAHO00519 579 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 EMC8O43402 210 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 SH3BP5O60239 455 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 SLITRK5O94991 958 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 ZNF888P0CJ79 500 aaPredicted RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 PPP2R1BP30154 601 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 BTN3A2P78410 334 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 RGS1Q08116 209 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 PTGES3Q15185 160 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 FAM92BQ6ZTR7 304 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 ELP4Q96EB1 424 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 THAP11Q96EK4 314 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 FCRL4Q96PJ5 515 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 WARS2Q9UGM6 360 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 MTCH2Q9Y6C9 303 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 A0A0G2JPF8 293 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 CLCA1A8K7I4 914 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 HNRNPCL2B2RXH8 293 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 HNRNPCL3B7ZW38 293 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 CTSVO60911 334 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 SEMA4FO95754 770 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 HNRNPCL4P0DMR1 293 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 NR2F1P10589 423 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 CHMP24386 653 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 MPIP34949 423 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 GPR18Q14330 331 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 GNA13Q14344 377 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 TMEM107Q6UX40 140 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 Q6ZSR6 202 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 AHSA2Q719I0 299 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 KRT73Q86Y46 540 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 P3H2Q8IVL5 708 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 GGHQ92820 318 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 GTPBP3Q969Y2 492 aaKnown RBP12.97□□□□□ -0.33
RTN3-210ENST00000540798 ROGDIQ9GZN7 287 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 PLGRKTQ9HBL7 147 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 MGAT4BQ9UQ53 548 aa12.97□□□□□ -0.33
RTN3-210ENST00000540798 HTR3EA5X5Y0 456 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 FAM221BA6H8Z2 402 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 P2RX6O15547 441 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 LGI1O95970 557 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 BCL10O95999 233 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 CDK1P06493 297 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 H1F0P07305 194 aaKnown RBP12.96□□□□□ -0.33
RTN3-210ENST00000540798 NR2F6P10588 404 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 TGFBR2P37173 567 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 FEN1P39748 380 aaKnown RBP12.96□□□□□ -0.33
RTN3-210ENST00000540798 RABIFP47224 123 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 ENTPD1P49961 510 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 CCR5P51681 352 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 CRISP1P54107 249 aa12.96□□□□□ -0.33
RTN3-210ENST00000540798 UBE2IP63279 158 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms